Tympanuchus pallidicinctus (lesser prairie-chicken): 128086904
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Entry
128086904 CDS
T08967
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128086904 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128086904 (CNOT10)
Messenger RNA biogenesis [BR:
tpai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
128086904 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
ARM_TT21_N
TPR_12
TPR_8
ARM_TT21
TPR_MalT
TPR_17
DUF6058
TPR_7
Motif
Other DBs
NCBI-GeneID:
128086904
NCBI-ProteinID:
XP_052551906
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
MAADKAADQGAEKHDGAGTSGITDQEKELSSSALQAFLAGNYDACLQHLNNLQDINKDDY
KITLNTAVAEFCKSNQTTTDNLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVILY
HLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYLLTYQAEKALHLLAVLEKMISQ
GNNNSKNGKNESGNNTNKDSSNQKAESGALIEVAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSANIAEHPGFMKTGECLRCMFWNNLG
CIHFAMGKHNLGIFYFKKALQENDNACAQLGTGSSDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGTSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNVVYNDGQSSAIPVASMEFAAICLRNALLLLPEEQQEPK
QENGSKPNNQLGGNTENSESSEACSNKSHEGDKFIAAPPSSPLKKQELENLRCSILACSA
YVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKQTPQCYPSSVTSARTMMLFNLGSAYCLRSEYD
KARKCLHQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVKTLSDMRK
KPVFQPVHSLQPIQMPTFTAVQRK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacaaggctgcggaccaaggtgctgagaagcatgatggagcgggtacttca
gggatcactgatcaggagaaggagctgtcgagcagtgcattgcaagcctttctggctgga
aattatgatgcctgtttgcaacacttaaataaccttcaagacataaacaaagatgactac
aaaataactttgaatactgcagttgcggagttctgtaaaagtaaccagaccacaacagac
aatttgagacaaaccctgaaccagctgaagaaccaggttcactctgctgtagaagaaatg
gatggtttagatgatgttgagaacagtatgctttactacaatcaagctgttattttgtat
catctgcgtcagtatactgaagctatatcagttggagagaagctgtaccagtttatagag
cctttcgaagagaagtttgcccaggctgtgtgcttcttgcttgtggacttgtacctgctg
acttaccaggctgagaaggccttgcatctccttgctgttctggaaaaaatgatttcacag
ggcaacaataacagcaagaatgggaaaaatgagtcaggtaataatacaaataaagattcc
tccaatcaaaaagctgaaagtggagctttaatagaagttgctaaatctaagatacatcag
tataaggtgagagcctatatccagatgaagtcactaaaagcatgcaaaagggagatcaag
tctgttatgaatacagctggaaattcagctccttctctctttcttaagagcaactttgaa
tatttgaggggcaattaccgtaaagcagtcaaacttttaaacagtgcaaacattgctgaa
catccaggcttcatgaaaacaggtgaatgcttacggtgcatgttttggaacaatcttggc
tgcatccactttgcaatgggaaagcacaatttaggaattttttacttcaaaaaagcctta
caagaaaatgataacgcatgtgcacagctaggaacaggcagctcagatccaggtaagaaa
ttttcagggagacccatgtgtacgctgctgactaacaaacggtacgagttgctctacaat
tgtggaattcagctcctgcacattgggaggcccttagctgcctttgaatgcctgattgag
gccgtccaggtttatcactcgaaccctcgtctttggctgagaatagcagaatgttgcatt
gctgccaataaagggacatcagaacaagagactaaaggtcttcccagcaagaaggggatt
gtgcaatctatagtaggtcaaggctaccaccgcaaaatagtcctagcatcccagtcaata
cagaatgttgtttataatgacgggcagtcctcagcaatacctgtagccagcatggagttt
gcagccatttgtctaagaaatgccttgctgttacttccagaagaacagcaggagccaaag
caggaaaatggatctaaacctaataatcagctggggggaaatacagaaaacagtgaaagc
agtgaagcatgcagcaataaaagtcacgaaggggataaattcattgcagctccaccttct
tcgcctctgaagaaacaggaattggaaaacttaaggtgctcaatacttgcctgtagtgct
tatgtggctctggctctgggagataaccttatggcactgaatcatgcagataagctcctc
cagcaaccaaagctgtcagggtctctgaagtttcttgggcatttgtatgcagcagaagct
ctcatctctcttgaccgaatatctgatgccatcactcacctgaaccctgagaacgtcact
gatgtttcccttgggatctcctcaaacgagcaggatcaagggtctgacaaaggagagaat
gaggcgatggagtcttctggcaagcagaccccccagtgctatcccagctcagtcacatct
gcacggacaatgatgctgtttaaccttggaagcgcttactgcttgcggagtgaatacgac
aaagctcggaagtgtctccaccaggctgcttcgctgatccaccccaaggagatccctccg
gaggctatcctgctggctgtctatctggagttacagaacggtaacactcagctggcgttg
cagatcatcaagagaaaccagcttctcccttcagtgaaaacgctctcagacatgcggaag
aagcccgttttccagccggtccactcgctccagcccattcagatgccgactttcaccgct
gtgcagaggaagtga
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