Tympanuchus pallidicinctus (lesser prairie-chicken): 128086932
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Entry
128086932 CDS
T08967
Symbol
PSMC3
Name
(RefSeq) 26S proteasome regulatory subunit 6A isoform X1
KO
K03065
26S proteasome regulatory subunit T5
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
128086932 (PSMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tpai03051
]
128086932 (PSMC3)
Proteasome [BR:
tpai03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
128086932 (PSMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_5
nSTAND3
AAA_16
RuvB_N
AAA_2
AAA_22
DUF815
Mg_chelatase
AAA_33
PhoH
DUF5827
AAA_24
IstB_IS21
AAA_7
AAA_28
ATPase
Motif
Other DBs
NCBI-GeneID:
128086932
NCBI-ProteinID:
XP_052551930
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MRGGDGAVLWHVWRIYWGEEQPAAGAALLPLLPLKVPANQRDAGLPQLPPAVGETRIRVI
ADAAGHGNRGASCWGRRGGSSGRPRCHRIGAPLFAHCCTRADRNKRCRRHQPVCRVRAGG
RGEGEWRSRWHRPHQDGGGGITQQIWQEHVTGAAAAVFPTADSAREVPRSGAPRAGVAAG
TGWGASPLRPSPLPLCCAPRVWRRESRIRREESAARRALAERKMASVWDESEDGVGEEVL
KMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVI
ELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVN
KDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFEN
LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFAL
AKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNR
VDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGA
QCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggaggagatggagctgtactgtggcatgtgtggagaatctattggggagaagaa
caaccagctgcaggcgctgccttgctcccacttcttccacttaaagtgcctgcaaaccaa
cgggacgcggggctgccccaactgccgccggctgtcggtgaaacccggatacgtgtgatc
gcggacgccgccgggcacgggaaccgcggcgcctcctgctgggggcggcggggagggtcc
tcggggcgccctcggtgtcaccgcatcggggcgcctctcttcgcgcactgctgtacgcgc
gctgaccggaataaacgctgccgccgccaccagcccgtatgccgcgtgagggcgggcggg
cgcggggagggggagtggcgctcgcgatggcaccgcccccaccaagatggcggcggaggc
atcacgcagcagatttggcaggagcacgtgaccggcgcggcggccgctgtcttcccgacc
gcagattcggcacgggaggtgccgcgcagcggggcgccgagggccggagtcgcggcggga
acggggtggggcgcgagccccctacggccgtcgccgctgccgctctgctgtgcgccccgc
gtctggcggcgggagagccggatccgccgtgaggaatcggccgcgcgccgcgcgctcgct
gagagaaagatggcgtcggtgtgggatgagtcggaggatggcgttggcgaggaggtgttg
aagatgtctacggaggagatcgtgcagcgcacccgcctgctcgacagcgagatcaagatc
atgaagagcgaagtgctgagagtgacccacgagcttcaggccatgaaagataagatcaaa
gagaacagtgagaagatcaaagtgaacaaaactctgccgtaccttgtctcaaatgttatt
gagctattggatgttgaccccaacgaccaggaggaggatggagcaaatattgacctggat
tcccagagaaagggcaagtgtgctgtcatcaagacctctacacgccagacgtatttcctg
cctgttatcgggttggttgacgctgagaagttgaagcctggagatctagtgggtgtgaac
aaggactcttacttgatcttggagactctgccaactgaatatgattcacgggtgaaagcc
atggaagtggatgagagacccacagagcagtacagcgacatcggggggcttgataaacaa
atccaagagcttgtggaggccatcgtcctgcccatgaatcataaggagaaatttgaaaac
ttgggtatacagcctcctaaaggagtccttatgtatgggcctccaggaacagggaagacg
cttctagctcgagcatgtgctgcccagaccaaggctacgttcctgaaacttgcagggccg
caacttgtgcagatgttcatcggtgatggagccaagctggtacgagatgcttttgctcta
gccaaggaaaaagctccttccatcatctttattgatgaattggatgccattggcactaaa
aggtttgatagtgaaaaggctggtgatcgggaagtgcagaggaccatgctggagctgctt
aatcaacttgatggtttccagcccaatacacaagtcaaggtgattgctgcaaccaaccgc
gtcgatatcttggaccctgccttgctccgctctggacgattggatcgtaagattgagttc
ccaatgcctaacgaggaggccagagccagaattatgcagatccattcacgcaaaatgaat
gtcagccctgatgtaaactatgaggaactggctcgttgcacagacgatttcaatggtgcc
cagtgcaaagctgtatgcgttgaagcggggatgattgccctccgccgtggagcaacagag
ctcacccatgaggattacatggaaggaatcttagaagttcaagcaaagaaaaaagccaac
ctgcagtactatgcctga
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