Tympanuchus pallidicinctus (lesser prairie-chicken): 128086940
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Entry
128086940 CDS
T08967
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tpai04990
]
128086940 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
tpai04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
128086940 (SNX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
128086940
NCBI-ProteinID:
XP_052551956
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MLAETSLSIWGWGSLGVVLFLITFGPFAIFYFAFYILCFVSGGFVVTLLFGKSNSEKYLE
QCEHSFLPCTSVGIPKCIEEMKREARPIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWY
YTLSDDESFLLEIRQALQYALVQFSARSKETDWQPYFTTKLVDDFGTHLRVFRKAQQRIA
EKGDQMKDQAEELVDTFFEVEVEMEKEVCRDLVCTSPKDEEGFLRDLCEVLLYILLPPGD
FQNKIMRYFVREILSRGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNIIKLSDNI
GELEAVKDKASEELQYLRSLDTAGDDINTIKNQINSLLYVIKVCDSRIQRLQSGKEIDTV
KLAANFGKLCTVPLDHILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVL
QSRQRDGKHQTNQTKGLLRAAAVGVYEQYLSEKASPRVNIDDNLVAKLAETLNHEDPTPE
IFDDIQRKVYELMLRDERFYPSFKQNVLYVRMLAELDMLKDPSFRGSDDGEGESFNGSPT
SSINLSLDDLSNVPSDETVQLHAYISDTVYADYDPYAVAGVCNDHGKTYALYAITVHRRN
ANSEETWKTYRRYSDFHDFHMRITEQFENLANILKLPGKKTFNNMDREFLEKRKKDLNAY
LQLLLNPEMMKASPALAHYVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKS
LPDSLAEGMTKMSDNMGKMSERLGQDIKQSFFKVPPLIQKTYSDPDHCRVAATIDDSVDD
NIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQ
VADAVKRFRDAFWPNGILAETVPRRDKAIRMRTRVAGKTKLLEIMPDELKHIIGAETTRK
GILRVFEMFQHTQLNKRMVYVFLERFLETLFPQNKFHELFNKLHSRSKQMQRYKQRLHST
QAPSLQKR
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgttagcagagaccagtctttccatatggggatggggaagtcttggtgttgtgcttttc
ctaataacttttggaccctttgctatattttacttcgcgttttatatcctctgctttgtg
agtgggggttttgtggttactcttttatttggaaaaagcaactcagaaaagtaccttgag
cagtgtgaacattcatttcttccttgtacatcagttggtatccctaagtgcatagaagaa
atgaaacgtgaagccagacctattaagattgacagaagattgacaggtgcaaatataatt
gatgagcctttgcaacaggtgatccagttttccctgagagactatgtgcagtactggtat
tacacactaagtgatgatgaatcgtttctcctggaaatcaggcaagctcttcagtatgca
cttgttcagttttctgccaggtcaaaggaaacagactggcagccttacttcactacaaaa
cttgttgatgacttcggcactcatcttcgagttttcagaaaagctcagcaaagaatagca
gagaaaggtgatcagatgaaagaccaagctgaggaacttgtagatacattctttgaggtt
gaagttgaaatggaaaaagaagtctgtcgtgacctagtctgcacttctcccaaagatgaa
gaaggattcctaagggatctgtgtgaggtcttactgtatatattgctacctcctggagac
ttccagaacaagatcatgcgatactttgtcagggaaatcctctcccgaggaattcttctt
ccattaataaaccaactcagtgatcctgattatattaatcagtatgtcatatggatgatt
cgtgattccaactgtaactatgaggcctttatgaatattattaaattaagtgataatata
ggagagttggaagcagtcaaagataaagcaagcgaagaactgcaatatcttcgatctcta
gatacagcaggagatgatatcaacactataaaaaatcaaataaacagtttattatatgtt
attaaagtatgtgattcaagaattcagaggttgcagtcaggaaaagaaatagatactgtg
aaactggcagcaaactttggaaaactttgcacagtccctctggaccatatcctggtagac
aatgttgcactacagttttttatggattacatgcagcagactggtggccaagcacatctg
tttttctggatgacagtggaaggatacagggttacagcacagcaacagctggaggtactt
caaagccggcaaagagatggaaaacatcagactaatcagaccaagggtctattaagagca
gctgcagttggagtttatgagcaatatttatcagaaaaggcatctccaagagttaatatt
gatgacaacttggtagcaaaactggcagaaacactgaaccatgaggatccaacacctgaa
atcttcgatgacattcaaagaaaggtgtatgaattgatgctgcgagatgaaagattctac
ccttcgttcaaacagaacgtattgtatgtccgcatgttagctgagctagacatgctgaag
gatcccagtttccgaggatcagatgatggtgagggagaatcttttaatgggtctcctact
agtagcataaatctgtccttagatgacctttcaaatgtcccttctgatgaaacagttcaa
ctccatgcatatatctcggatactgtatatgctgactatgacccatatgctgtggcagga
gtgtgtaatgaccatggcaagacgtacgcgctgtatgctatcacagtccatcggagaaat
gcaaacagcgaggaaacatggaagacatatcggcgctacagtgacttccatgactttcac
atgaggatcactgagcagtttgaaaatctggcaaacatactgaaacttcctggcaaaaag
acatttaacaatatggacagagaattcttggagaagaggaaaaaagatttaaatgcgtat
ttgcagctcctgttaaatcctgaaatgatgaaagcttctccagctctagcccattatgtg
tacgacttcttggaaaataaggcctacagcaaaggcaagggggattttgcacggaagatg
gacacatttgtaaacccactgcgtaactctatgagaaatgtatcaaatgcagtcaagtct
ctccctgacagcctcgcagagggaatgactaaaatgtcagacaacatgggtaaaatgtca
gagagactgggacaagacataaagcaatcatttttcaaggtgcctcctttgatccagaaa
acctattcagatcctgaccattgccgtgttgcagcaacaattgatgacagtgtggatgac
aatattcctcttcgagtaatgctcctcctaatggatgaagtctttgatttaaaggaaaga
aatcaatggttaagaagaaatataaagaatcttcttcaacagcttattagagcaacatat
ggtgacacaattaataggaaaatagttgatcatgttgactggatgacatctcctgaacaa
gtagcagatgctgtgaaacgcttcagagatgccttttggcccaatggcattttagcagag
accgttccacggagagacaaagctattagaatgagaacaagagtagcagggaagaccaaa
ttgctagagataatgccagatgaattgaagcacatcataggtgctgagacgacacgaaaa
ggtattcttcgggtctttgagatgttccagcatactcaactgaataagagaatggtatat
gtctttctggagagatttctagaaaccttgtttccacaaaataagttccatgagctcttc
aacaaactgcattcacggtcaaagcagatgcagaggtataaacagagactacattctact
caagcgccttccttgcagaaaaggtga
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