Tympanuchus pallidicinctus (lesser prairie-chicken): 128086941
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Entry
128086941 CDS
T08967
Symbol
HDAC9
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpai03036
]
128086941 (HDAC9)
Enzymes [BR:
tpai01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
128086941 (HDAC9)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
128086941 (HDAC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
128086941
NCBI-ProteinID:
XP_052551961
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MFCCFLFSVDVKSEVPVGLEPISPLDLRTDLRMMVPMVDPIMREKQLQQELLLIQQQQQI
QKQLLIAEFQKQHENLTRQHQAQLQEHIKELLAIKQQQELLEKEQKLEQQRQEQELERHR
REQQLPPLRGKERVRERAVASTEVKQKLQEFLLSKSATKDSPANGKNHSVSRHPKLWAAH
HTSLDQSSPPLSGASPPYKYTLPGSQDAKDDFPLRKTASEPNLKVRSRLKQKVTERRSSP
LLRRKDGNVVSSFKKRLFEVTESSVSSSSPGSGPSSPSNGPTSSITESETSVLPSSIQAE
HLVSQQRLLIQDESVNLLSLYTSPSLPNITLGLPAVQSQISASSSFKEKQKGETQTLRPG
VALAGQYGGNIPPSSTHPHVALEGKPNSSHQALLQHLLLKEQMRQQKLLVTGAVPLHPQS
PLAAKERVSPGIRAAHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQI
HMNKMLSKSIEQLKQPGSHLEEAEEELNGDHSMQEERAPASGASIRAESSSAGEDDRIGQ
QAGAVKVKEEPPDSDEDTQTQQMESGEQAAFVQQVIGKDLAPGFVIKVII
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgttttgttgttttcttttctcagtggatgtgaagtcagaggttcctgtgggattagag
cctatctcaccattagacttacgaactgatctcaggatgatggttcccatggtggaccca
attatgcgtgaaaagcagctacagcaggagctacttctgatccagcagcagcagcaaatt
cagaaacaactgctgattgcagagtttcagaaacagcatgaaaacctgacccgccagcac
caggcccagctccaggagcacataaaggaactcctagccattaaacagcagcaagaactt
ctcgaaaaagagcagaaactggagcaacagagacaagagcaggaactggagaggcatcgc
agggaacagcagcttcctcccctcagaggcaaagaaagagtccgagaaagggcagtagcc
agtacagaagtgaagcaaaaacttcaggagttcctgttaagtaaatcagcaacaaaagac
tctccagcaaatggaaagaatcattccgtgagccgccaccccaagctctgggctgcccac
catacctcactggatcaaagctctccacccctgagtggggcctcgccgccatacaaatac
actttaccaggatcacaggatgccaaggatgattttccactccgtaaaacagcttcagag
cccaatttgaaggtacgctcaaggttaaaacaaaaggtaacagaaaggcgaagcagtcct
ttactgaggaggaaggatggaaatgttgtcagctcgttcaagaagcgactctttgaggtg
acagaatcctcagtcagtagcagctcccctggatcaggtcccagttccccaagcaatggt
ccaaccagcagtataacagaaagtgaaacctcggttttgccatctagcattcaagctgag
catctggtttcacagcaacgccttttgatacaggatgaatcagtgaacttgttgagtctg
tacacgtccccttctttgcccaacattaccttgggacttccagctgtacaatctcaaatc
agtgcttcatcatcattcaaagaaaagcagaagggagagacccagacactcagaccagga
gtggccttggctggacagtatggggggaatattcccccctcttcaactcatcctcatgtt
gctttggagggaaaaccaaacagcagccaccaggctctcttgcaacatctgttactgaaa
gaacagatgagacaacagaaacttcttgtaactggagcggttcctcttcatccccagtct
cctttggcagcaaaagaaagagtctcacctggcataagggctgcccacaaactgcctcgc
cacaggcctctgaatcgaacccagtcagctcctcttcctcagagcactttggcgcagctg
gtcatccaacagcaacatcaacagtttttggagaagcagaaacagtaccagcaacagatc
cacatgaataagatgctctccaaatccattgagcagctaaagcagcctggcagccacctg
gaggaagctgaagaagagctgaatggagaccactcaatgcaggaggagcgagctcccgct
agtggggccagcattagggctgagagcagcagtgctggtgaggatgacagaataggacag
caggcgggggctgtgaaggtcaaagaggagccaccggacagtgatgaggatactcaaacc
cagcaaatggaatctggggagcaagctgcttttgtgcaacaggtaataggcaaagattta
gctccaggatttgtaattaaggttattatctga
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