Tympanuchus pallidicinctus (lesser prairie-chicken): 128087013
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Entry
128087013 CDS
T08967
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03022
Basal transcription factors
tpai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128087013 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
128087013 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpai03021
]
128087013 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
tpai03400
]
128087013 (GTF2H1)
Transcription machinery [BR:
tpai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128087013 (GTF2H1)
DNA repair and recombination proteins [BR:
tpai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128087013 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
128087013
NCBI-ProteinID:
XP_052552105
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLNAGDNSAAPSKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEREFWTRFFQSHYFHRDRLNTGSKD
LFAECAKLDEKGLKAMVSQGVKNPMIDLTALEDRTLDEGYGVAPVASTSNASKTARESSN
AAIIKRFNHHSAMVLAAGLRKHPLSSRREADEPSSTLLPHDVIREAQNDHYSETSSTDGN
SRDSDFFQPPMKKVKLQESIEYEDLAMNNSTKTIALNLKKSDRYYHGPTPIQSQQYATSQ
DIINSFHSIRQEMEAYVPNLTQVLSSGDATSTIAVLSPGGALMQGGTQQAINQMVPNDIQ
SELKHLYVAVGELLRHFWSCFPVNTPFLEEKVVKMRSNLERFQLTKLCPFQEKIRRQYLS
TNLISHIEEMLQTAYNKFHTWQSRRMLKKT
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgtcatcagaagaagtgttactgattgtaaagaaggtccgccagaagaagcag
gatggagctctgtaccttatggctgagaggatagcgtgggcacccgaaggcaaagaccgc
ttcacagtcagccacatgtatgcagacataaaatgccagaaaatcagtccagaaggtaaa
gctaaaattcagcttcagctagtattgcatgcaggggacacaaccaactttcacttctcc
aacgaaagcacagcagtgaaggagcgagatgcggtaaaagaccttcttcaacaactcttg
cccaaattcaagaggaaagctaataaagaacttgaggagaagaacagaatgctgcaagaa
gatcctgttttgtttcagctctataaagaccttgttgtgagccaagtaatcagtgctgaa
gaattctgggccaaccgtttaagcctgaatgcaggggataattctgcagcacctagtaag
caggatgtgggcatctctgcagcatttctggctgacgtacgacctcaaacagatggctgc
aatggtctgaggtacaatttgacttcagatatcattgaatccatatttcgaacatatcct
gcagtgaaaatgaaatatgcagaaaatgttccacataacatgacagaaagggaattctgg
acgcgattttttcagtctcattatttccaccgggacagactcaacacaggctcaaaagac
ctctttgctgaatgtgccaaactggatgagaaagggttaaaagcaatggtgtctcaagga
gtgaaaaaccctatgatagatttaacagctttggaagacagaacgttagatgaaggctat
ggtgttgctcctgtggcctctacatcaaatgcctcaaaaactgctagagaaagtagcaat
gctgccattataaaacgctttaatcatcacagtgccatggtccttgcagctggcctcaga
aaacaccccctgagcagcagaagagaggcagatgaaccctcttcaactctccttccacat
gatgtcataagagaagcacaaaatgaccattacagtgagaccagcagtacggatggaaac
tccagggattcagatttctttcaaccaccaatgaaaaaggtgaaactacaggaatccatt
gaatatgaagatttagcgatgaataatagcactaaaactattgcactaaatttaaagaaa
tctgacaggtattatcatggtccaactccaattcaatcacagcaatatgcaaccagtcag
gatataattaattcttttcatagtattaggcaagaaatggaagcatatgtacccaatcta
actcaggttctttcaagtggtgatgctactagcacaattgcagtcctgtcacctggagga
gcacttatgcagggtggaacacagcaagccataaaccagatggtgccaaatgacattcag
tctgaattaaaacatttgtatgtggcagtaggggaactgctaagacacttctggtcctgc
tttcctgttaacacaccattcctagaagaaaaggttgtgaaaatgaggagcaacttggaa
agatttcagcttacaaagctctgcccattccaagaaaagattcggagacagtatttaagc
acaaatttgataagtcatatagaagagatgctgcagacagcctacaataagttccacacg
tggcagtcccggcgtatgctgaagaagacgtga
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