KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128087018
Entry
128087018         CDS       T08967                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    128087018 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tpai03400]
    128087018 (TDP1)
DNA repair and recombination proteins [BR:tpai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     128087018 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 128087018
NCBI-ProteinID: XP_052552118
LinkDB
Position
Unknown
AA seq 606 aa
MLQEGAHGRWTVSSSEDSTEENSDSEKPSTSSLPCAQRSEASAPQYLCSEARRAAHKRKA
SPLKFVDTCLPAHTPPAEKQRPGQEGLGWCLSSSDEEPEDQVKHASKETPKEEKCDAPRE
QPRSHCKDEHSKGVKAEDYNEAPGEPQDTWDLLSGGNPFGFFLTKVRGIEQSYNSGALHI
KDILSPLFGTLVSSAQFNYCIDVAWLVRQYPQEYRKKPLLIVHGEKRESKAELLAQARPF
ENISFCQAKLDIAFGTHHTKMMLLLYEEGFRVVIHTSNLIAEDWHQKTQGMWLSPLYPRL
PQGSSDSAGESETNFKSDLISYLMAYNSPVLKEWIDLIREHDLSETRVYLLGSTPGRYQG
IDKEKWGHLRLRKLLKEHTSSIPAQESWPVVGQFSSIGSLGADGSKWLCSEFQESLVAAG
SGVSALLKCDVPIHLVYPTVNNVRQSLEGYPAGGSLPYSIQTAQKQLWLHSYFHKWSAEV
SGRSHAMPHIKTYMRPSHDFQKIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELGVLFL
PSAFGLDNGYFHVKGKMLSEGKDSATSFPVPFDLPPEQYGSKDQPWIWNIPYTSAPDTHG
NMWVPS
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgcttcaggaaggcgcccacgggcggtggactgtgtctagcagtgaggacagcactgaa
gagaattctgacagcgaaaagccctcgacgtcctcgctgccgtgtgcccagcgcagtgaa
gcgagtgcgccgcagtacctctgctctgaggccaggagggccgctcacaaaaggaaggct
tctccgctgaagtttgttgacacgtgtctccctgcgcatacacctcctgcagaaaagcag
aggcctggccaggagggcttgggatggtgcctttctagtagcgatgaagagcctgaagac
caggtgaagcatgccagcaaggaaacaccgaaagaggaaaagtgcgatgcacccagagag
caacctcggagtcattgcaaagatgaacattcaaagggtgtgaaagcagaggactataat
gaagcacctggtgaaccccaagatacctgggatttgctgagtggagggaacccttttggg
ttttttctcaccaaagttaggggaattgagcagagctataattctggagccctgcacata
aaagatattttgtctcctctttttgggacccttgtatcttctgctcagtttaactactgt
atagacgtggcatggctcgtaagacagtatccacaggaatacaggaagaagccactgctg
atagttcatggtgaaaagagagagtccaaagctgaactacttgcacaagcacgccctttt
gagaacattagcttctgtcaggccaagctggatattgcatttggaactcaccatacgaaa
atgatgttgttattatatgaagaaggttttcgagttgtgatacatacatccaatcttatt
gctgaagactggcaccagaaaactcagggaatgtggctaagccctttatatccaaggcta
cctcagggatcatctgattctgctggtgaatctgaaactaattttaaatctgacttaata
agttacttgatggcttacaattctcctgtgctcaaggaatggatagatctgattcgagag
catgatttatcagagacaagagtgtatctgcttggttctacccctggacgatatcaaggt
attgataaagagaagtggggtcatcttaggctcagaaagcttttgaaagagcatacttca
tcaataccagcacaggaatcttggcctgttgtaggacagttctcaagcattggttccctg
ggagcagatgggtccaaatggctgtgctcagaattccaggagagcctggtggctgcaggc
agtggtgtgtcagctcttcttaaatgtgatgttccaattcatttggtttatcctactgtg
aacaatgtgaggcaaagtctggaaggctatcctgctggtggttcccttccatacagcata
cagacagcacagaaacagctgtggttacattcctattttcacaaatggtcagcagaagtc
tctggtcgaagtcatgccatgcctcacatcaagacatacatgagaccttctcatgacttc
cagaagattgcatggtttttagttacaagtgccaatctatctaaagcagcatggggagct
ctggagaaaaatggcacccaattgatgatccgttcatatgaacttggagtccttttcttg
ccttcagcatttggattggacaacggttacttccatgtgaaagggaaaatgctttcagaa
ggtaaagattcagcaacatcttttcctgtgccatttgatctgcctccagaacagtatgga
agcaaagaccagccgtggatttggaatattccttacactagtgcccctgatacgcatgga
aatatgtgggttccgtcatga

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