Tympanuchus pallidicinctus (lesser prairie-chicken): 128087190
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Entry
128087190 CDS
T08967
Symbol
LRFN5
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tpai04990
]
128087190 (LRFN5)
Domain-containing proteins not elsewhere classified [BR:
tpai04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128087190 (LRFN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
fn3
C2-set_2
Ig_DSCAM-DSCAML_C
LSR
C2-set_3
Motif
Other DBs
NCBI-GeneID:
128087190
NCBI-ProteinID:
XP_052552530
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MEKLLLFLLFIGIAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLAD
NFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFS
GLSNLHHLILNNNQLTLISSTAFDDVLALEELDLSYNNLETIPWDAVEKMVSLHTLSLDH
NMIDHIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPQLLSGRYFWSIPEEEFLCEPPLITRHTHELRVLE
GQRAALRCKARGDPEPAIHWISPEGKLISNATRSVVYDNGTLDILITTVKDTGSFTCIAS
NPAGEATQTVDLHIIKLPHLLNSTNHIHEPDPGSSDISTSTKSGSNASSSNGDTKVSQDK
KVVVAEATSSTALLKFNFQRNIPGIRMFQIQYNGTYDDSLVYRMIPPTSKTFLVNNLAAG
TMYDLCVLAIYDDGITSLTATRVVGCTQFTTEQDYVRCHFMQSQFLGGTMIIIIGGIIVA
SVLVFIIILMIRYKVCNNNGQHKATKVSNVYSQTNGAQVQGCGGALSQSASKQAVGHEEA
AQCCRAAGDGAGPSPEPSPGPEATTTSPSPHAWAAGASAAQKPKRKPGPKPSSEPQSEAA
TSIESQNTNRNNSTALQLASRPPDSDQGVPTYKRAQSKPSKFLTLPATTSRAKRRLSLGG
ELLLCRCQQDAGLCSRRSLSMNGMLAQAGRSGAEGGTATFSSSEWILESTV
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgcttttgtttctgctgttcattggcatagcagtgagagctcagatctgc
ccaaagcgctgcgtttgtcagattttgtctccaaaccttgcgaccctttgtgccaagaag
gggctcttatttgttccaccaaacattgacaggaggaccgtggaattacggctggcagac
aactttgttacaaatatcaagaggaaagactttgccaacatgaccagcctggtggacctg
acgctatccaggaatacaatcagttttatcacacctcacgcgtttgctgacttgcgcaat
ttgcgggctttgcatttgaacagcaaccgattgactaagatcaccaatgacatgttcagt
gggctctccaatcttcatcacttgatacttaacaacaaccagctgactcttatttcttcc
acagctttcgatgatgttttagctcttgaggaattggatttgtcttacaacaacctggaa
acgatcccctgggatgctgtggaaaagatggttagcttgcacaccctcagtctggaccac
aatatgattgatcatattcctaaggggaccttctcccatctccacaagatgaccaggtta
gacgtcacgtctaacaaactgcagaagctaccacctgaccctctctttcagcgagctcag
gtactggcaacctcaggaattatcagcccttctacttttgcgttaagctttggtggaaac
cctttgcattgcaactgtgagctcttgtggctgaggcgtctctccagagaagacgacctg
gagacgtgtgcctctccccagctgctgtcgggccggtacttctggtcgatccctgaggag
gagttcctgtgcgaacctcctctcattaccaggcacacccacgagctgagggtgctggag
ggccaaagggcagcgctgaggtgcaaggcccggggggatccagagccagcaattcattgg
atttcacctgagggcaaacttatttctaacgcaacaaggtctgtggtatatgacaacggt
acactcgacatcctcatcacaacagtgaaggacacgggctctttcacctgcatcgcttcc
aacccagcaggggaagccacacagacggtggacctgcacataatcaaactccctcacttg
ctgaacagcactaaccacatccacgagcctgaccctggctcctcggatatctcaacgtcc
accaagtcgggctccaatgcaagcagcagcaatggggatacaaaagtcagccaagacaag
aaggtggttgttgctgaagcgacatcatctactgctctgctgaaattcaattttcaaaga
aacatacctggaatacgcatgttccagatccagtacaatggcacttatgatgactctctg
gtgtacaggatgatacctcccacgagcaaaaccttcctggtgaacaacctggctgctggg
accatgtatgacctgtgcgtcttggccatctacgacgacgggatcacctcgctgaccgcc
accagggtggtgggctgcacgcagttcaccaccgagcaggactacgtgcgctgccacttc
atgcagtcccagttcctgggcgggaccatgattatcatcatcggcgggatcatcgtggcc
tcggtgctcgtgttcatcatcatcctcatgatccggtacaaggtgtgcaacaacaacggg
cagcacaaggccaccaaggtcagcaacgtttactcgcagacgaacggggcccaggtgcag
ggctgcggcggggcgctgtcccagtctgcctccaagcaggcggtggggcacgaggaggcc
gcccagtgctgccgggccgccggcgacggcgccggaccctcgccggagcccagccccggc
ccggaggccaccactacctcgccctctcctcacgcgtgggccgccggcgcctccgctgcc
cagaagccgaagcggaagccggggccaaagcccagcagcgagccgcagagcgaagctgcc
acgagtatcgagtcccaaaacactaacagaaataactccactgctctgcagctagctagc
cgtccccccgactctgaccaaggggtccccacgtacaaaagagcacaatccaagccaagt
aagttcctcaccttgccggccaccacgtccagagccaagcgcaggctgtcactgggcggc
gagctgctgctgtgccgctgccagcaggacgcggggctgtgctcccggcgcagcctctcc
atgaatgggatgctggcgcaggcgggccgctccggcgcggagggcggaacagcgacgttc
tcgagctctgagtggatattggaaagcactgtgtga
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