Tympanuchus pallidicinctus (lesser prairie-chicken): 128087200
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Entry
128087200 CDS
T08967
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpai03041
]
128087200 (PRPF39)
Spliceosome [BR:
tpai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128087200 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_12
TPR_16
Mad3_BUB1_I
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
128087200
NCBI-ProteinID:
XP_052552566
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MENSTMQSSDNTEEEKTTTAAAVSSDGTGNGAETAAEEQNMDFSTEIMSVTEMEQSPDSS
PGLNEDNTQEEGEIPNIGSLQTTDIEAGFPPDFDKFWKVVEDNPQDFTGWVYLLQYVEQE
NHLPAARKAFDKFFTHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIH
YINFLKDTLDPDDPEANSTIRGAYEHAVLAAGTDFRSDRLWEMYINWEDEQGNLREVTSI
YDRILGIPTQLYSHHFQRFKDHVQNNLPRDLLTSEQFIQLRRELASVNGHAGGDASAGDD
LPSGTEDITDPAKLITEIENMRHRIIEIHQEMFNHNEHEVSKRWTFEEGIKRPYFHVKPL
EKAQLKNWKEYLEFEIENGTHERVVVLFERCVISCALYEDFWIKYAKYMENHSIEGVRHV
YSRACTIHLPKKPMVHMLWAAFEEQQGNIDEARRILKTFEECILGLAMVRLRRVSLERRH
GNMEEAERLLEEAVRNAKSVSESSFYAIKLARHLFKVQKNLPKARKVLSDAIEIDKENTK
LYLNLLEMEYCGDLTQNEENILSCFDKAVNGSLSIKMRVTFSQRKVEFLEDFGSDVNKLL
DAYDEHQALLKEQDTLKRRAENGSEEPDEKKMLTDEQTMASAQMMDGDMQVNQAAYNYNA
WYQYNYQNAWNYGQYYSPST
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactcgactatgcagagctcagataatacagaggaggagaagacaacaacggca
gcggctgtaagcagtgacggcactggcaatggtgctgaaacagcagcagaagagcagaat
atggacttcagcacggaaattatgagtgtaactgagatggaacaatcacctgatagttcc
cctggcctgaatgaagacaacacgcaagaagagggggaaattccaaacattgggagttta
cagacaacagatattgaggctggcttccctccggattttgacaagttctggaaagtagta
gaggacaatccccaggatttcacaggatgggtctatctactgcagtacgtagagcaagag
aaccacttgccagctgccaggaaagcctttgacaagtttttcacacactatccatattgc
tatgggtactggaagaagtacgcagacctggagaagagacatgacaacatcaagcagtcc
gatgaggtttatcgcagagggcttcaggcaattcctcttagtgttgatctttggatacat
tatataaacttcttaaaagacaccttggaccctgatgaccctgaagctaacagtactatt
cgaggagcctatgaacatgcagttttagctgctgggacagatttccgttctgacagactg
tgggaaatgtatataaactgggaggatgagcagggaaacctgagggaagttacatccata
tatgatcgtatccttggaattccaacacagctctacagtcatcacttccaaaggtttaaa
gaccatgtccagaacaacttgcctcgagacctgctgacttctgagcagtttatccagctg
cgcagagagctggcatctgtgaatggccacgcagggggcgacgcgtcggctggcgacgac
ctgccctcgggtaccgaggacatcactgaccctgccaagctaatcactgaaatagagaac
atgaggcacagaatcattgagattcatcaggaaatgttcaatcacaatgaacatgaagtc
agtaagaggtggacatttgaagaagggataaagaggccttacttccacgtgaaacctctg
gagaaagctcagctaaaaaactggaaagagtacttagaatttgagatagaaaatgggacg
catgaacgagttgtggtcctctttgagagatgtgttatttcatgtgccctctatgaggac
ttctggatcaagtatgccaaatacatggagaatcatagtattgaaggagtgaggcatgtc
tacagcagggcttgcacaatacaccttcctaagaaaccgatggttcacatgctgtgggct
gcctttgaggaacagcagggcaacatcgatgaggcgaggagaatcctgaagacctttgag
gagtgcattctaggcctggccatggttcgcttgcgcagagtgagcttggagcgcaggcac
gggaacatggaagaagccgagcgcctgctggaagaagctgttaggaatgccaagtcagtt
agtgaatcctcattctatgccatcaaattagctcggcacctcttcaaagtgcagaaaaat
ctcccaaaggcaagaaaagtgctgtcagatgccatagaaatcgacaaagaaaatacaaag
ctgtacctcaacttgcttgaaatggagtactgtggtgatctcacacaaaacgaagaaaac
attctgagctgttttgataaagctgttaatggctctttgtctataaaaatgagggttacg
ttttcacagcggaaagtggaatttcttgaagattttggttctgatgtaaacaagcttttg
gatgcatatgacgagcaccaagcacttctgaaggagcaggatactttaaagaggagagca
gagaacggatcggaggagccagatgagaagaaaatgctcacagacgagcaaaccatggca
tcagcacagatgatggatggagacatgcaggtcaatcaggcagcatacaactataatgcc
tggtatcagtacaattaccagaacgcatggaattatggacagtattattctccttcaact
tga
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