Tympanuchus pallidicinctus (lesser prairie-chicken): 128087578
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Entry
128087578 CDS
T08967
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04270
Vascular smooth muscle contraction
tpai04625
C-type lectin receptor signaling pathway
tpai04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
128087578 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
128087578 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
128087578 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128087578 (ARHGEF12)
Membrane trafficking [BR:
tpai04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
128087578 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
PH_13
SOS1_NGEF_PH
Ribonuc_2-5A
Pept_S41_N_bact
Mga
PDZ_Tricorn
DUF3967
AAA_23
Motif
Other DBs
NCBI-GeneID:
128087578
NCBI-ProteinID:
XP_052553226
LinkDB
All DBs
Position
Unknown
AA seq
1545 aa
AA seq
DB search
MSGTQPATTDRFPLKKPTRHGSILSRESPADKKQKVERCSSTHDFDPTDSSSKKTKSSSE
ESRSETYGLVQRCVVIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVDLAAFGHMSPIMTSPHSP
GTSGNAERITSPVLMGEENNIVHNQKVEILRKMLQKEQERLQSLQEEYSRSSSSRLLREI
QETKKHITQLQEQLSKATGCAQDGVLSSRSVAESLQVSEVEAESGDALSKLDYSSDSPSR
PNSDIADSPRSGLKERVYLDESPEKTEVQDTDSQSSIGSPSSRVGPQIIGAEDDDFDTEQ
EQINGQCSCFQNIELLKSRPAHLAVLLHHVVSQFDPAALLCYLYSDLYKQTNAKETRRVF
LEFYQFFLDRAANLKVPIPDEISVDLEKRRPELIPEELHRHYIQTMQDKVCPEVQRNLED
FRQKRSMGLTLAEGELTKLDAERVRDRNAVEKERACAEQIIAKIEEVLMTSQPLEEDKSS
TIQYVILTYMKHLGVKAKEARNLEQKRGRIGFLPKIKVQSIKKEKEGDEKGKRRGFPNLL
GPPRRPSRHDSSAIGRAMEIQKQRHQKHIPAVPSVSPEPPDSGKVRQSGACSDGTDAPYP
PANPMSPLAVGPFSSPEGNKDSESGSKQTGEAPPANECVDGTPRTPNTTFEFPSPLENLP
EEEGESERVVDMGTPKPFRKMDSVGFADVQSEDELYDFDMDTDPPNWQQLVSREVLMGLK
PYEIKRQEVINELFYTERAHVRTLKVLHNVFYQRVTREGILNSSDKKKIFSNLEDILGLH
VALNDQMKAVRKRNETSVIDQIGEDLLSWFSGAAEEKLKHATATFCSNQPFALEVIKSRQ
KKDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYTELPEEKEKVKK
AADHCRQILNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMMDEFRNLDLTKRKMLH
EGPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILASTADSKHTFSPIIKL
STVLVRQVATDNKAFFVISMSENGAHIYELVAQTVSEKNVWQDLIAQMAGNVKMESSRRV
IPLTQSGPGEEEREEEEQQKLKDQHDIPASSLQSPDKDLGLDSQLILNAQTSPTMSEKSE
VESLLVAERQFDKVQQADLALKEASPCYEHTATNLPLVSGGQWALDALRNLDLLKKLLVQ
QLGFAEKGTLEDRQRFPRFRTVSQEAQTEGGSELGLQHSDHNKFHQPGADSTLPRSGTNE
PTANYGLRTSAESPAPGDAMQLGARDPRPSSNLAMDRMGVNLEVSATELEGLGADESGEH
FFDAREAHSDENPSESELMERKDEEDVQIRISGNCLILDGYEAVQESSTDEEVSSLVLQG
AAGGHSSLDSAQQQPLSPRDTQSDGGSSPFAEEMMVSRWGGVEEPCTVVANPPFWSIESR
VQMMQYIQKIENNLEKLKEVEEDYIILRRQGLAGSASTGEHSEKS
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagcccgcgaccacggacaggtttcctcttaaaaaacctacaaggcac
ggcagcattctgagcagagagtctccagcagacaagaagcagaaggttgagcgctgcagc
agcacccacgacttcgatccgacagatagctcctccaagaagacaaagtctagttcggag
gagagtagatccgagacgtatggtcttgttcagcggtgtgttgttatccaacgggatgaa
aatggatttgggctgacagtcagtggagacaacccagtctttgtgcagtctgtcaaagaa
gatggagcagccatgcgagctggagtgcaaacgggtgatagaattatcaaggtgaatggc
actcttgtaacacactcaaaccatttggaggtggtaaagctgatcaagtcgggttcctat
gtagctctcactgttcaggggcgcccaccggggtcgccccagattcctttggctgattct
gaagtggatctggcagcatttgggcatatgtctcccatcatgacatcaccccattcgcct
ggcacatcaggaaatgcagaaaggattactagcccggtgcttatgggggaggagaataat
attgtccacaaccagaaggtggagattctgagaaagatgctacagaaagagcaggagcgg
ctgcagtctctgcaagaagagtacagccgatcttccagctcacgactgctcagagagata
caggaaacaaagaagcacattactcagctgcaggagcagctgtccaaagccacaggctgt
gctcaggatggagttttgtcctccaggtctgtggcagaatcgctgcaggtcagtgaagtg
gaggcagagagtggagatgctctgagcaaactggattacagtagtgacagcccctctcga
ccgaacagtgacattgctgatagtcctcgcagtggcctgaaggagcgggtttatctggat
gagagcccagagaagactgaggttcaagatactgattctcagtccagcattggaagtcct
tcatcccgtgtgggaccacagatcattggagcagaggatgatgactttgacactgagcag
gagcagataaatggacaatgcagttgtttccaaaacattgagctcctgaagtctcgccca
gctcacctggctgttcttctgcaccatgtggtgtcccagtttgaccctgcagcattgttg
tgctacctttactcagacttgtacaagcagaccaatgcgaaggagactcggcgtgtcttc
ctggagttttaccagttcttcttggaccgagctgcaaatcttaaagttccaataccagat
gaaatctctgtagatctagagaaaagaaggccagaactcattcctgaagagcttcatcgc
cactatatacaaactatgcaagataaagtctgtccagaagttcagaggaatctggaagat
ttcaggcagaaacgtagtatggggttgaccctggcagagggagagttgaccaagttggat
gcagaaagggttcgtgaccggaacgcggtggagaaggaaagagcatgtgcagaacagatt
attgccaagattgaggaagtcctgatgacatctcagcctttggaggaagacaagagctcc
accatacaatatgtgattcttacttacatgaagcacctgggagtcaaagctaaagaggct
cggaacctggagcagaagcgtggccgtattggtttcttgccaaagatcaaggtacaaagc
atcaagaaagagaaagaaggagatgaaaaaggaaagaggagaggctttcctaatctcttg
ggtccaccgaggagaccgagccgacatgacagcagtgcaattggcagagccatggagata
cagaagcagcgccaccaaaagcacatccctgcagtgccttctgttagcccagagcctcca
gattcgggcaaggtgcgccagagtggggcctgcagcgatggcacagatgcaccataccca
cctgccaaccccatgtctccgttggcagtgggtcctttctcatctccagagggaaacaag
gacagtgaatcaggctcgaagcagacaggagaagccccacctgctaatgagtgtgtggat
ggcacaccccgcacacccaacactacttttgaattcccatctcccttggaaaacttgcca
gaggaggagggagagtcagagagagtggtcgacatggggacaccaaagccttttcgcaag
atggacagcgttggttttgcagatgtgcaaagtgaggatgagctgtatgactttgacatg
gacacagaccctcccaactggcagcagcttgtgagccgagaagtgctgatggggctgaaa
ccctatgagatcaagaggcaagaagtgattaatgagctgttttacactgagagagctcat
gtccgcaccctgaaggttctgcataacgttttctaccagcgtgtcacccgggaagggatc
ctcaactccagtgacaaaaagaagatcttttcaaacctggaggatatcctggggcttcat
gtggcattaaatgatcagatgaaagcggtccggaaaaggaatgagacttctgttattgac
caaattggggaggatttgctttcttggttcagtggagcagcagaggagaagctgaaacat
gccactgccacgttctgcagtaaccagccctttgctctagaggtcataaagtcccgccag
aagaaagactctcgtttccagactttcgtgcaggatgctgagagtaatcccctgtgtcgc
cgcctgcagctgaaggatatcattccaacagagatgcagaggttgacaaagtaccccctt
ctgctggataacattgcaaagtacacagaactgcctgaagagaaggagaaagtgaagaaa
gcagcagatcactgccgtcagatccttaaccacgtgaaccaggctgtcaaggaatcggag
aacaagcagcatctggaagattatcagcgtcgtctcgacctgtcctacttaaagcagtct
gaggatcccatgatggatgagttcaggaacttggatctcacaaagagaaaaatgcttcac
gaaggacctttgacttggaaggttaatcgtgacaaaactatcgatctctacactctgctc
ttggaggacattctggtgctgttgcaaaaacaagatgataagctggtcttgaagtgtcac
agtaaaatcttggcgtcgacggctgatagcaaacacaccttcagtcctatcatcaaactg
agcactgttctggttcgtcaggtggcaacagacaacaaagcgttcttcgtcatctccatg
tcagaaaatggtgctcacatttacgagctggtggcacagacagtttcagagaagaacgta
tggcaggaccttatagctcagatggcagggaatgtaaaaatggagagtagcagaagagtg
attccattaacgcagtcgggacctggcgaagaagagcgtgaagaagaggagcagcagaag
ctcaaagaccagcatgacattcctgccagtagcctacaaagcccagacaaagatctgggc
ctggactctcaattgatactgaatgctcagacttcacccaccatgtctgaaaagtccgag
gtggaaagccttcttgtggcagaaagacagtttgataaagtgcaacaggcagacctggcc
ctgaaggaggcttctccctgctatgaacacacagccaccaatttacctttggtgtcagga
gggcagtgggcactggatgcattaaggaacctggacttgctgaaaaagctgttggtccaa
cagcttggctttgctgagaaggggaccctcgaagaccggcagcgcttccccaggttcagg
accgtctctcaagaggcacaaacagaggggggaagtgagcttggattgcagcactccgac
cataacaaatttcaccagcctggagcagactccacgcttccaagaagcggaactaacgag
cccacagctaattatggcctccggacttcagctgaatcaccagctccaggagatgccatg
cagctgggagcgagggaccccaggcccagcagtaacttagcgatggaccgcatgggtgtg
aatctggaggtctctgccacggagctggaagggctgggtgctgatgagagtggggagcat
ttctttgatgcccgagaagctcacagtgatgaaaatccatctgaaagtgagctgatggaa
aggaaggacgaggaggatgtgcaaatacggatctcaggaaattgtttgatccttgatgga
tatgaagcagtgcaggagagctccacggatgaggaggtgtcgtctctggttctccagggt
gctgcaggtggccacagctctttggactctgcacagcagcagcccctttccccacgggac
acgcagtcggatggaggcagctccccgtttgcagaggagatgatggtttcccgctgggga
ggagtggaagagccctgcacggttgtagcaaaccctcccttctggtctatagagtcacgc
gtgcagatgatgcagtatattcagaagatagagaataaccttgaaaagttaaaggaggtt
gaggaagactacatcattctccgtcgccaagggctggctgggtcagcctccacaggagag
cactcagagaaaagttag
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integrated database retrieval system
