Tympanuchus pallidicinctus (lesser prairie-chicken): 128087616
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Entry
128087616 CDS
T08967
Symbol
NCAM1
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
tpai04514
Cell adhesion molecule (CAM) interaction
tpai04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
128087616 (NCAM1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128087616 (NCAM1)
04517 IgSF CAM signaling
128087616 (NCAM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128087616 (NCAM1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tpai04515
]
128087616 (NCAM1)
04090 CD molecules [BR:
tpai04090
]
128087616 (NCAM1)
00536 Glycosaminoglycan binding proteins [BR:
tpai00536
]
128087616 (NCAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tpai00537
]
128087616 (NCAM1)
04091 Lectins [BR:
tpai04091
]
128087616 (NCAM1)
Membrane trafficking [BR:
tpai04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
128087616 (NCAM1)
Cell adhesion molecules [BR:
tpai04515
]
Immunoglobulin superfamily
NCAM1/2
128087616 (NCAM1)
CD molecules [BR:
tpai04090
]
Proteins
128087616 (NCAM1)
Glycosaminoglycan binding proteins [BR:
tpai00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
128087616 (NCAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tpai00537
]
Others
128087616 (NCAM1)
Lectins [BR:
tpai04091
]
I-type lectins (Siglecs)
128087616 (NCAM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
C2-set_2
Ig_MYOM1
C1-set
C2-set_3
V-set_CD47
Fn3_ROS1
Receptor_2B4
Ig_PDGFR_d4
Pur_ac_phosph_N
Muramidase
Motif
Other DBs
NCBI-GeneID:
128087616
NCBI-ProteinID:
XP_052553310
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MLPAAALPWTLFFLGAAASLQVDIVPSQGEISVGESKFFLCQVAGEAKYKDISWFSPNGE
KLTPNQQHISVVRNDDFSSTLTIYNANIDDAGIYKCVVSSVEEGDSEATVNVKIFQKLMF
KNAPTPQEFKEGDDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIK
KTDEGTYRCEGRILARGEINFKDIQVIVNVPPSVRARQSTMNATANLSQSVTLACDADGF
PEPTMTWTKDGEPIEQEDNEDKYSFNYDGSELIIKKVDKSDEAEYICIAENKAGEQDATI
HLKVFAKPKITYVENKTAMELEDQITLTCEASGDPIPSITWKTSTRNISNEEKASWTRPE
KQETLDGRIVVRSHARVSSLTLKEIQYTDAGEYVCTASNTIGQDSQAMYLEVQYAPKLQG
PVAVYTWEGNQVNITCEVFAYPSAVISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDS
ENDFGNYNCTAVNRIGQESSEFILVQADTPSSPSIDRVEPYSSTARVEFDEPEATGGVPI
LKYKAEWRALGEGEWHSRLYDAKEANVEGTITISGLKPETTYSVRLSAVNGKGVGEISLP
SDFKTQPVRIPHSREPSAPKLEGQMGEDGNSIKVNVIKQDDGGSPIRHYLIKYKAKHSSE
WKPEIRLPSGSDHVMLKSLDWNAEYEVYVIAENQQGKSKPAHYAFRTSAQPTVIPASTSP
TSGLGTAAIVGILIVIFVLLLVAVDVTCYFLNKCGLLMCIAVNLCGKSGPGAKGKDMEEG
KAAFSKDESKEPIVEVRTEEERTPNHDGGKHTEPNETTPLTEPEHTTDTAATVEDMLPSV
TTGTTNSDTITETFATAQNSPTSETTTLTSSIAPPATAIPDSNAMSPGQATPAKAGAAPV
SPPPPSSTPKVAPLVDLSDTPSSAPATNNLSSSVLSNQGAVLSPSTVANVAETSKAAAGN
KSAAPTPANLTSPPAPSEPKQEVSSTKSPEKEAAQPSTVKSPTETAKNPSNPKSEAASGG
TTNPSQNEDFKMDEGTFKTPDIDLAKDVFAALGTTTPATVASGQARELASSTADSSVPAA
PAKTEKTPVEDKPEVQATETKTPPAEVKTVPNEATQTNENESKA
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccgccgccgcgctgccctggacgttgtttttcctcggagccgcagcctctcta
caagtggatattgttcccagtcagggagagatcagcgttggagaatccaagttcttctta
tgtcaagtggcaggggaagccaaatacaaagacatttcctggttttcccctaatggtgag
aagctgacgcccaaccagcagcacatctcagtggtgcgaaacgacgacttctcctccacc
ctcaccatctacaatgccaacattgatgatgctggcatctataaatgtgttgtcagcagc
gtggaggagggagactctgaagccaccgtcaatgtgaaaattttccaaaagctcatgttc
aagaatgcccccactcctcaggaattcaaggaaggggatgatgctgtgattgtgtgtgat
gtggtcagctcactgcctcctaccatcatctggaaacacaaaggcagggatgtcatcctg
aaaaaagatgttcggtttatagtgctgtccaacaactacctgcagatccggggaatcaag
aaaacagatgaggggacgtaccgctgtgagggccgcatcctggctcgtggggagatcaac
ttcaaagacattcaggtcattgtaaatgtacctccttctgtgcgtgccaggcagagcact
atgaacgccactgccaacctcagccagtctgtcaccttagcatgtgatgctgatggcttt
cctgagccaaccatgacgtggacaaaggatggagagccgatagagcaggaggacaatgaa
gacaaatacagttttaactacgatgggtctgagctgatcatcaagaaggtggataagagt
gatgaagcagagtacatctgcattgctgagaacaaggctggcgagcaggatgccaccatt
catctcaaagtctttgcaaaacccaaaatcacgtacgtggagaataaaacagcgatggag
ctggaggaccagatcacattgacctgtgaggcatctggggacccaatcccttccatcacg
tggaaaacctccacccggaacatcagcaacgaagagaaggcttcgtggacccggcccgag
aaacaagagaccctggatgggcgcatcgtggtgcgcagccacgcgcgggtttcgtccctg
actctcaaagaaatccaatacacagatgctggagagtacgtgtgcacagccagcaacacc
atcgggcaggactcgcaggccatgtacctcgaagtgcagtatgctcccaagcttcagggc
cctgtggccgtctatacctgggaagggaatcaagtgaacatcacctgtgaggtatttgct
taccccagtgctgtcatctcctggttccgggatggacagctgctccccagctcaaactac
agcaacatcaagatctacaacactccatcagcaagctacctggaggtgacaccagactct
gaaaatgactttgggaactacaactgcactgctgtgaaccgcattggccaggaatcctca
gagttcattcttgtgcaggcggatactccgtcctctccttctattgacagagttgagccc
tactctagtactgcccgcgtggagtttgatgagcctgaagctactggtggggtgcccatc
ctcaagtacaaagcagagtggagagcactgggtgaaggagaatggcactcgagattgtat
gatgcaaaagaagcaaatgtggagggcacaatcactatcagtggcctgaaacctgagaca
acctactcggtgagactgtctgcagtcaatggcaagggtgtgggtgagattagtctgcca
tccgacttcaagacacagccagttcgtatccctcactcacgggaacccagtgcacccaaa
ctggaagggcagatgggagaagacggaaactccatcaaagtgaatgttatcaagcaggat
gacggtggctccccaatcaggcattacctgatcaaatacaaagctaaacattcctcagaa
tggaagccagagatcagactgccttctggcagtgaccatgtaatgctcaagtctctggat
tggaatgcagagtatgaggtttatgtgatagctgaaaaccagcaagggaagtccaaacct
gctcactatgctttccggacatctgctcagcctactgtcatcccagccagcactagccct
acgtcaggcctggggactgctgccatcgtaggcattctcattgttatctttgtgctgctc
ctggtggctgtggatgtcacctgctacttcctgaacaaatgtggcctgctgatgtgcatt
gctgtcaacttatgtggcaagtctggaccaggagccaagggcaaagacatggaggagggc
aaagctgccttctcgaaagatgagtccaaggagcctattgtggaggtgcggactgaagag
gagcggacccccaaccacgatgggggaaaacacacagagcccaacgagaccacaccactg
acagaaccagagcacaccaccgataccgcagctactgttgaggacatgctgccttctgta
actacgggcaccactaactctgacactatcactgaaacttttgccactgctcagaacagc
cccaccagtgagaccaccaccctgacctccagtattgccccaccagccacggccattcct
gactcaaacgccatgtcgcctggccaggctactccagccaaagcgggagctgccccggtc
tctccgccaccaccctcttctacgcccaaagtggctccccttgttgatctcagcgatacc
ccaagctctgctccagctactaacaatttgtcttcaagtgtcctgtccaaccaaggtgcg
gtgctgagccccagcactgttgctaacgtggccgagacctccaaagcagcagctggtaac
aagtcagctgccccaacccctgcaaacctcactagccctccagctccatcagagcccaag
caggaggtctcaagcaccaagagccccgagaaagaagctgcgcagcccagtacagtgaag
agcccaacagagacagccaagaacccgagcaacccgaagagcgaggctgcttcaggcggc
accacaaacccctcccagaatgaggactttaaaatggacgaagggaccttcaagacacca
gacattgatcttgcaaaggatgtttttgcagctcttggcactactactcctgccactgtg
gctagcgggcaagctcgtgagcttgcttcttccactgcagacagctctgtacctgctgca
cctgcaaagaccgagaaaaccccagtagaagacaaacctgaagtgcaagcaacggaaact
aagacacctccagcagaagtgaagacggtccccaacgaagccacacaaacaaatgaaaat
gagagcaaagcatga
DBGET
integrated database retrieval system
