Tympanuchus pallidicinctus (lesser prairie-chicken): 128087825
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Entry
128087825 CDS
T08967
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03013
Nucleocytoplasmic transport
tpai03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128087825 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128087825 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128087825 (NUP153)
Messenger RNA biogenesis [BR:
tpai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128087825 (NUP153)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
128087825
NCBI-ProteinID:
XP_052553713
LinkDB
All DBs
Position
Unknown
AA seq
1457 aa
AA seq
DB search
MASGGGGGTGGGAGGGGGKIRTRRYHLGAAKPPYGRSRQQGIISRMTESVKNIVPGWLQK
YFNKSEDECVDTNESTNQEENPVNYHHNYRDEDTIMTDGRVTPEPAGINLEEPSTSRSAL
NFSVVLTRPSLHRSHLNCTVLDSAVPPCQPSTSSTLGIGNPGLSLVKEIKDSTSQHDDDN
ISTTSGFSSRASDKDIAVSKTNSAPLLWSTEAERSHSLSQHSASSSKKPAFNLSAFGALS
PSLGNTSVFKTSQLGDSPFYPGKTTYGGAAAAARQTKVRIAPYQTPVRRQMKAKQANVQS
YGVTSSTARRILQSLEKMSSPLADAKRIPSSVTSPLSSPVDRSVLDITGFHSSRKQMESH
HPPVQKLVTPKAISLSGSRTQYFKPSLTPSADSSKIHQRVDTKHKEVKEKSLPEEQRVEP
SESNLTYPKFSTLASNGLTSGGSGGGKMRRERGVHYVSKSGQEQEVEEPVLPKISLPIST
ASLAPFNFSFLTSSTVSSSPSTVSTSVMNKVQPTSNVGSPVFRFSSPIVKSTEAEVLPPL
SQMGFTFSVPVVKSAERSGCSDTAATPFLTRDTSAVNSISNKKEEKEEYDGPFKPAKVLK
EGSVLDVLRNPGFTSVKTQSSASAQPITSTVVYTRPAISSFSAGKETSKQASSYWQTDPC
DPCLQNKATDSKCVTCQAAKVSTAESTKQTMSSSPSGSTKAAASPVGMLGFGDKFKAAPG
TWDCDTCLVQNKPEATKCVACETPKPGMGVMPTLALPVTTESSVTVTSSSSSTDTTVTLG
FGDKFKKPKGSWDCATCFVSNKAEDSKCVACQSEKPGSSVPVTSSSASAFAAPSGQLLDL
DKFKKPEGSWDCEVCLVQNKPEATKCVACESAKPGTKAEFKGFDASAVSTNAAMPSFTFG
VQSSSSDSQTSSTAGSFKFGEQGSFKFGIASESASSSAAPGGFKFPSSSGNFKFGVSSSD
SKSEENKKEDKSNNFTFGLPSTSSPAPLTFQFGTASLGQQEKKEQQPVLGGFSFGSSSTS
SITTNENKTAVAGFTFGTVAENEVASASFAFKKPDERKDETPPTKGGFSFGNVESAPASQ
FVLGRTEEKQDSVSSAAPLVFGKKADSEESKAQPVFSVGQSEHTKEESTAKPMFNFSFVK
PSEKETEQAKPAFSFGAQASTSDQGAAKPSFSFLSSSSSSTAVPTTSANSSSVFGSVTSS
SNPAPVPTPFVFGQASNTVSSTAFGNSAESTASQSFGFSQESKPATTSSTTGAAVAPFVF
GSGASSSSAASSGFTFGATATSSSTGSSSSFVFGSGSSAPAAGPAFGAGQLPAFGQSQGP
GQPNAPSFGSLSTTLFSAGPQPAPPAFGSVTSSTQSPVFGQQSSQQPGFGSGTSSAGPVF
QFGSSTSNFNFTSNPEVFTFGANPPAPAAPVQPSGSSGFSFSLSPAFTVGTNGKNIFSAS
GSSVSGRKIKTAVRRRK
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggcggcggcggaggaacgggaggaggagccggcggcggcggcggcaagatc
cggacccggcggtaccacctgggagccgcgaagcctccgtacggcaggagcaggcagcag
ggaattattagcagaatgacagaatcagtgaaaaacatcgtaccaggatggctacagaag
tattttaataaaagtgaagatgaatgtgtagatacaaatgaatctacaaatcaggaagag
aatccagtaaattatcatcataattatagagatgaagataccataatgaccgatgggaga
gtcacacctgaaccagcaggaattaacctggaagaaccatccacgagtagatcagcattg
aacttttcggttgtgttgacaaggccgtctctgcatcggagccatttgaactgtaccgtg
ttggattccgctgtgccaccttgtcagccctctacatcttctacacttggcattggcaat
cctggactgtctcttgtaaaagaaataaaagattctacctctcagcacgatgatgataac
atctcaacaaccagtggcttctcctctagagcgtctgataaagatattgcagtttcaaaa
accaattcagcaccactgctctggtccacagaagctgaaagatctcattccctctcccag
cattctgcatctagttcaaagaaacctgcattcaatttatctgcttttggagctctctct
ccttcgcttggaaacacttctgtctttaagacaagccagcttggagattctccattttac
cctggaaagaccacttatggtggagcagctgcagcagcaaggcagacaaaagtgcgaatt
gctccttatcagacaccagtaagaaggcaaatgaaagctaaacaagcaaacgtgcaatcc
tatggtgtgacaagttccacagcacggcgcatcctgcagtctctggagaagatgtcaagt
cctctggcagatgctaaaagaattccatcttctgttaccagtccgctgtcttctcctgtg
gacagaagcgtgctggatattacgggcttccattcctctcgaaaacagatggaatctcac
cacccgcctgttcaaaaactggtgacaccaaaggcaatctctctgtcaggaagtcggacc
cagtattttaaaccatctctgactccatctgctgattctagcaaaattcaccagagagta
gatacaaagcacaaagaagtgaaagagaagagtttgcctgaagaacagcgtgtggaacca
tctgaaagcaatttgacctaccccaaattcagtactcttgcatccaatggtctgacttca
ggaggaagtggtggtggcaagatgagaagggaaagaggggtacactacgtatcaaagtct
ggacaagaacaggaagtagaggaaccggtactcccgaaaatatccctgcccatcagtact
gcatcactggctcctttcaacttcagttttctgactagcagtactgtctcgtcgtcacca
agcactgtttccacatcagtgatgaacaaggtacaaccaacaagtaatgttggcagtccc
gtgttcagattttcatctcctattgtgaaatctactgaggcagaagtgctacctccgttg
tctcagatggggtttacattcagtgttcctgttgtaaaatcggcagagcgctctggatgc
agcgatacagcagcgacgcccttccttacccgcgataccagcgctgtaaacagcatcagc
aataaaaaggaagaaaaagaagagtatgatggtcccttcaaacctgcaaaggtcttaaag
gaagggagtgtgttagacgttctaagaaaccctggatttacatctgtaaaaacacaatcc
tctgcatctgcacagcctatcacaagcacagtggtctatacaaggcctgcaataagtagt
ttttctgcaggtaaagagacctcgaaacaagcatcatcatattggcagactgatccgtgt
gacccgtgtttgcagaacaaagccacagacagcaagtgtgtcacttgccaagctgctaaa
gtgtcaacagctgagagtacaaaacagacgatgagctcaagtccgagtggctccacaaag
gcagcagcctctccagtggggatgctgggctttggagacaaattcaaggcagcgcctgga
acgtgggattgtgatacttgtctggtccagaacaaacctgaagctaccaaatgtgtagca
tgtgagacaccaaagcctgggatgggagtaatgcctactctggcattgccagtgaccaca
gagagctcggtgactgtgacatcctcctccagcagcactgacaccacagtcactctgggc
tttggagacaagtttaagaagccaaaaggctcttgggactgtgcaacatgctttgtatca
aataaggcagaagatagcaaatgtgtagcctgtcagtccgagaaaccagggagttcagtg
cctgtgaccagcagcagtgcgtctgcatttgctgctccttctggacaacttctggattta
gacaaattcaagaagcctgaaggaagctgggattgtgaggtctgcttggtccaaaacaaa
ccggaggccacaaagtgtgtagcctgtgaaagtgcaaagccaggcaccaaagcagagttc
aaaggttttgatgcttctgctgtgtccacaaatgctgcaatgccatcatttacatttggt
gttcagtcatcatcctctgattctcaaacatcgagtaccgcaggaagttttaaattcgga
gaacaagggagcttcaagtttggcattgcatcggaatctgcatcttctagcgctgcgcct
gggggattcaagtttcctagcagttctgggaacttcaaatttggagtttcatcctcggac
tctaaatcagaagagaataaaaaggaagataaaagtaacaattttacctttggccttccg
tctacaagtagtccagctcctttaacgtttcagtttgggacagcaagcctgggacagcag
gaaaagaaagagcaacaaccagtattgggaggtttcagttttggttcaagttctacttct
tccataactaccaatgagaataaaaccgcagtcgctggcttcacttttggaactgtggca
gaaaatgaagttgcgtcagcttcttttgcatttaagaaaccagatgagagaaaggacgaa
actcctccaaccaagggaggcttctcttttggtaacgtggagtcggcacctgcctcgcag
tttgttttgggaaggacagaagagaaacaggattctgtcagttctgctgctccgttggtg
tttgggaagaaagctgacagtgaagagtcaaaggcacaacctgtcttttccgtcgggcag
tctgagcataccaaagaagaaagcacagcaaaacctatgttcaacttcagctttgttaaa
ccatcagagaaggaaaccgagcaggcaaagccagctttttcatttggggcccaagccagt
acttcagatcaaggagcagcaaagccatccttcagcttcttgagctccagttcctccagc
acagctgtgcccaccacttcagccaacagcagcagcgtgttcggcagcgtcacctcttcc
tccaaccctgcaccggttcccactcccttcgtgtttgggcaagccagcaacactgtgagc
agcactgcttttggcaattctgcagaatctacagcatctcagtcatttggcttctctcaa
gaaagcaaaccagcaaccacatcttccaccactggtgcagcagttgctccgtttgtcttt
ggttcaggagccagcagtagcagtgcagcaagttctggctttacctttggagccacggcc
acatcaagttcaacagggtcgtcctcttcatttgtctttgggtctgggtcttcagcgccc
gctgctggcccggcctttggtgccggtcagctaccagcatttggccagagccagggcccc
ggccagccgaacgctcccagctttggatccctgtcaacaacgctgttttcagctggccct
cagcctgcgcctcctgccttcggctctgtgacgagcagcactcagtcccctgtgtttgga
cagcagtcgagccaacaaccgggttttggctccggcacctccagtgctggtcccgtattc
cagtttggaagtagtacttctaatttcaactttacaagtaacccagaagtatttactttt
ggtgcaaatccccctgcaccagcagcaccggtacagccttctggctcttcaggattttca
ttcagcctgtctccagcatttacagtggggactaatggaaaaaatattttctctgcctct
ggatcttcagtttctggtcggaagataaagactgcagttagacgtagaaagtaa
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integrated database retrieval system
