Tympanuchus pallidicinctus (lesser prairie-chicken): 128087889
Help
Entry
128087889 CDS
T08967
Symbol
SOX4
Name
(RefSeq) transcription factor SOX-4
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpai03000
]
128087889 (SOX4)
Transcription factors [BR:
tpai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128087889 (SOX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
128087889
NCBI-ProteinID:
XP_052553831
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MVQQTGTAENTEALPAAETSAAGVGLELGIASSPTPGSTASTGGKADDPSWCKTPSGHIK
RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHM
ADYPDYKYRPRKKVKSGNSSAKPADKADRAAGGGGGGAGPGGGSAGGGSGGGTAKPAPKK
GGGGGGPRPSPAGTKPHGKAAAGGKASPPGTGEPTAAPTPPPPPPPEHQALYKPRGAPAA
PGKAAAERKLKRVYIFGGGGPAAAASGSPGGAVPGSPTLSSAAEAGDPLSLYEEAGGAAR
PDGDCPSPPGARSPAEHRGYAGPRAASPAPSTARSSSASSHSSSASSAGSSSSDDEFEDD
LLDLNPSPGFESMSLGGFGSSALDRDLDFNLEPGSGSHFEFPDYCTPEVSEMISGDWLES
SISNLVFTY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcagacgggcacggcggagaatacggaggcgctgcccgccgccgagacctcg
gccgccggggtcgggctggagctgggcatcgcctcgtcgcctacacccggctcaaccgct
tcgacgggcggcaaggcggacgacccgagctggtgcaagacgcccagcgggcacatcaag
cgaccgatgaatgccttcatggtgtggtcgcagatcgaacggcggaagatcatggagcag
tcgcccgacatgcacaacgccgagatctccaagcggctgggcaagcgctggaagctgctc
aaggacagcgacaagatccccttcatccgggaggcggagcggctgcgcctcaagcacatg
gcggactaccccgactacaagtaccggcccaggaagaaggtgaagtcgggcaacagctcc
gccaagcccgcagacaaggcggaccgggccgccggcgggggcgggggcggcgccgggccc
ggcgggggcagcgcgggcggcggctccggcggcggcacggccaaacccgccccgaagaag
ggaggcggcggcggcggtccgcggccctcccccgccggcaccaagccccacggcaaggcg
gcggcgggcggcaaggcctcaccgccgggcaccggcgaaccgacggccgcgcccactccg
ccgccgccgccgccgcccgagcaccaggcgctgtacaagccgaggggcgcgccggcggcg
cccggcaaagcggcggccgagaggaagctgaagcgcgtctacatcttcggcggcggaggg
ccggcggcggccgcctcgggctcgcccggaggcgccgtgcccggcagccccacgctgagt
agcgcggccgaggccggcgacccgctgagcctctacgaggaggcgggcggcgcggcgcgg
cccgacggggactgcccctcgccgcccggcgcccgctcgcccgccgagcaccgcggctac
gccggcccgagagccgcctcgcccgccccctccacggcgcggtcctcctccgcgtcctcc
cactcgtcctccgcctcctcggccggctcctcgtcgtcggacgacgagttcgaggacgac
ctcttggacctgaaccccagccccggcttcgagagcatgtccctgggcggcttcggatct
tccgcgctcgaccgggacctggattttaacttggagcccggctcgggctcgcactttgag
ttcccggactactgcacgccggaggtaagtgagatgatctcgggggattggctggagtcc
agcatctccaacctggtgttcacctactga
DBGET
integrated database retrieval system
