Tympanuchus pallidicinctus (lesser prairie-chicken): 128087895
Help
Entry
128087895 CDS
T08967
Symbol
NFATC1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1 isoform X1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04010
MAPK signaling pathway
tpai04020
Calcium signaling pathway
tpai04148
Efferocytosis
tpai04218
Cellular senescence
tpai04310
Wnt signaling pathway
tpai04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128087895 (NFATC1)
04310 Wnt signaling pathway
128087895 (NFATC1)
04020 Calcium signaling pathway
128087895 (NFATC1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128087895 (NFATC1)
09143 Cell growth and death
04218 Cellular senescence
128087895 (NFATC1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
128087895 (NFATC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpai03000
]
128087895 (NFATC1)
Transcription factors [BR:
tpai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
128087895 (NFATC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
128087895
NCBI-ProteinID:
XP_052553846
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MPSAAPPASAAPPSRDPAASGRERPPAAPQHGARLLGSTMKAAEEEHYNYTSSNVNAGLP
LNVAHSSLSTPCHGLQTSNPIISVVPSTNHPSGYGGHIDSGASDYYLPPNIRPNGAPALE
SPRIEITSYMGLHHNNNQFFHDEVEEAIPNAKRSPSTATLNLPNLEAYRDPSCLSPASSL
SSRSCNSEASSYESNYSYPYTSPQTSPWQSPCVSPKTTDTEEGYQRGMVACTLLNSPRHS
PSTSPRTSITEENWLGARSSRPPSPCNKRKYSLNGRQASYSPHHSPTPSPQNSPRVSVTD
ETWLGNTNQYTSSAIVAAINALTTDSTIDMNDGIPIKSRKTAIDHTPSMTLKTEPAGEDH
GTISPTADLSPEDFSSFQHIRKGNFCEQYLSVPQHPYQWAKPKSLSPTSYMSPSLPALDW
QLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPIVQLHGYLESEPLTLQLF
IGTADDRLLRPHAFYQVHRITGKTVSTTSHETILSNTKVLEIPLLPENNMRATIDCAGIL
KLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQSNGRTLSLQVASNPIECSQRSAQELPL
VEKQSTDSFPVTGGKKMVLTGHNFLQDSKVIFLEKAPDGHHVWEMEAKTDKEMCKPNSLV
VEIPPFRNQRITSPVQVNFYVCNGKRKRSQYQLFTYLPANVPIIKTEPTDDYEPAQTCGP
MNQGLSPLSKPYYNQQIMMPPDPGSCLMAGFASCQQRNTVMSPSPNASPKLHDLSSSPYK
CIPNPGHSHLGLQQPAGGVPTIQEVPRSIVVHPSSPEQSSHIMLQPQVSQHLSSSCPLGY
QQTLYPNSPSSPVPSVTQEPTYLQSCSPTHSSIMGQQQQQLPKVHRNESPTTQPLSLPEL
HEESNHNLAPIPVTIKREPEELDQMYLDDVNEIIRNDLSSTNVHS
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcgctgccccgccggcctccgccgcgccgccgtcgcgggatccagcagccagc
gggagagagaggccgccggcggccccgcagcacggagcccgcctgctcggcagcaccatg
aaggcggcggaggaagaacactataattatacatcttcaaacgtaaatgctggcttgcct
ctaaatgtggcacattcctcattgtcaactccatgtcatggccttcagacatcaaatccc
atcatttcagttgtcccatcaacaaatcatccttctggatacggaggacacattgacagc
ggggcctccgactattacctgcctccaaacatcagacctaacggagctccagctctggag
agccccagaatcgaaatcacttcttacatgggactgcatcataacaacaatcagtttttc
catgatgaggtggaagaggccatcccaaatgccaagcgatcaccttccactgccactttg
aacttaccaaaccttgaggcatacagagacccgtcctgcctgagcccagctagtagcttg
tcttccagaagctgcaactctgaagcgtcttcctacgagtccaactactcgtatccatac
acttcaccccagacctctccgtggcagtccccgtgcgtctctccaaagaccactgacaca
gaggaggggtaccagcgcggcatggtggcctgcactttgctcaattctccaaggcactcg
ccatcgacgtctcccaggacgagcatcacagaggagaactggctgggggcgcgcagctcc
aggcctccatctccctgcaacaagagaaagtacagcctcaatggccggcaggcctcctac
tcaccgcatcactcccccacgccttcgccacagaactcaccgcgagtgagtgttacggat
gagacgtggctaggaaacaccaaccagtacaccagctctgccattgtggctgccataaat
gctctcaccaccgacagcacgatagatatgaatgatgggatccccatcaagtcaaggaag
actgccatcgaccacaccccgtccatgactctcaaaactgaaccggctggcgaggatcat
gggaccatatcgccgactgccgacttgtcaccagaagacttctctagcttccagcatatc
aggaaaggaaacttctgcgagcagtacttgtctgtgccacagcatccgtaccagtgggcc
aaaccaaagtctctgtctcctacatcctacatgagcccatccctgcctgcccttgattgg
cagctgccgtctcactcaggaccttatgaactgcgtattgaagtgcagcccaaatcccac
caccgagctcattatgagacagaaggcagtcgaggggctgtgaaggcatctgctgggggc
caccctattgtacagctccatggttacttagaaagcgagcccctgacgctacagctgttc
attgggactgcagacgaccgcctgctgcgaccccatgctttctaccaggttcatcgaatc
actgggaagactgtttccaccaccagccacgaaacaatactttccaacaccaaagtcttg
gaaatcccacttcttccagagaacaacatgagagcaaccattgactgtgctggaatatta
aagctcagaaactctgacattgagctgcggaagggagaaacagacattgggcggaagaac
acacgtgtgcgactggtcttccgagttcacatcccacagtccaacgggaggaccctctct
ttgcaagtagcttccaaccctatcgagtgctctcagagatctgcccaagaactgcctctg
gtggagaagcaaagtactgacagctttcctgttactggagggaaaaagatggttctgact
ggccataactttctgcaagactcgaaagtcatctttttggagaaagcaccagatggtcac
catgtgtgggaaatggaagccaaaactgacaaagaaatgtgcaagccaaattcgctggtg
gttgagataccacctttccgcaatcagagaattaccagccctgttcaggtcaacttctat
gtctgcaatggaaagagaaagagaagccagtaccagcttttcacctatcttcctgctaat
gttccaattataaaaacagaacccacagatgactatgagcctgctcaaacctgtggacca
atgaaccaaggcttaagccctctctctaaaccatactacaaccagcagatcatgatgccc
cctgatcctggttcgtgcctcatggctggcttcgcctcctgtcagcagaggaacacggtg
atgtcaccctctcccaacgcaagccccaagctgcacgacctttcatcctctccttacaag
tgcatccccaacccaggccacagtcacctcggacttcagcagcccgctggaggtgtcccc
accatacaggaagtgccaaggtctatagttgtgcacccaagctcccccgagcaatcatct
cacatcatgctgcagccgcaggtgagtcaacatctgagcagtagctgtccccttggttat
caacaaacactctatcccaacagtccctcttctccagttccatctgttacccaagagcca
acctatttgcagtcctgcagtccaactcactcatccataatgggtcaacagcagcagcaa
ctgccgaaggttcacagaaatgagtctccaacaacccaaccactgtcattgccagagttg
catgaggaaagtaatcataatttggcccctattcctgtaacgatcaagcgagaacctgag
gaattggaccagatgtacctggatgatgtaaatgaaattataaggaatgacctttccagc
accaatgtccattcatag
DBGET
integrated database retrieval system
