KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128088060
Entry
128088060         CDS       T08967                                 
Symbol
BCAS2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128088060 (BCAS2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tpai03041]
    128088060 (BCAS2)
   03400 DNA repair and recombination proteins [BR:tpai03400]
    128088060 (BCAS2)
Spliceosome [BR:tpai03041]
 Complex B
  Other components
   Prp19 complex
    128088060 (BCAS2)
 Complex C
   Prp19-CDC5 complex
    128088060 (BCAS2)
DNA repair and recombination proteins [BR:tpai03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    128088060 (BCAS2)
SSDB
Motif
Pfam: BCAS2 THOC7 HAUS2 EzrA INO80F CCDC113_CCDC96_CC Tup_N SCRG1 DUF3440 GAS DUF3450 Filament OmpH
Other DBs
NCBI-GeneID: 128088060
NCBI-ProteinID: XP_052554163
LinkDB
Position
Unknown
AA seq 225 aa
MAGPGLVAGDVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLPAHDCSA
FETEIMRNEFERLAARQPLELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQHGCNAWKVYNEHLVHMIEQAQKELQKLRKSIQDLNWQRKNMQLTAGAKLRE
MESTWVSLVSKNYEIERTIVQLENEISQIKQQHGEANKENIQQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcgggaccggggttggtggcgggcgacgtggtggtggacgcgctgccctacttcgat
cagggctacgaggcgccgggcgtgcgcgaggcggctgcggctcttgtggaggaggagacg
cggcgctaccggcccacgaagaactacctcagctacctgccggcacacgactgcagcgcc
ttcgagaccgagatcatgcggaacgagttcgagcgcctggcggcccggcagcccctggag
ctgctcagcatgaagagatacgaactgccggctccctcctccgggcagaagaacgacatc
acggcgtggcaggaatgcgttaacaactccatggcgcaactggagcaccaggctgtgcgc
atcgagaacctggagctgatgtcccagcacggctgcaatgcttggaaggtgtacaatgaa
catctggttcatatgatagaacaagcccagaaggagcttcagaagttgcggaagagcatt
caggatctgaactggcaacgaaagaacatgcagctcacagctggagctaagctacgagaa
atggaatccacgtgggtgtctcttgtcagtaagaactacgagattgaacgaacaattgtg
cagctagaaaatgagatttcccaaatcaaacaacagcacggggaagcgaacaaggagaac
atccagcaggacttctga

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