Tympanuchus pallidicinctus (lesser prairie-chicken): 128088061
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Entry
128088061 CDS
T08967
Symbol
OPTC
Name
(RefSeq) opticin isoform X1
KO
K08128
opticin
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tpai00535
]
128088061 (OPTC)
Proteoglycans [BR:
tpai00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
128088061 (OPTC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
128088061
NCBI-ProteinID:
XP_052554165
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MALGHRMQTLAWVGIASLCLGATWAVPAKKERKKVEKPKPDLVLYENLDLENYDMTLDSY
GDIMDLNNYEELYDYGDLAPKIEVGTLAPRPKDRGTLPELGTAAPTPKLQPLATTNPTRP
APLGPNTAQGLPSCLRCLCIRTSVYCDDTDLEHIPPLPPDTTYLYARFNRIGAIRAGDFM
GLKKLKRIDLTSNSISWADVDAFRLLPSLQELILPENRLTALPELPRSIVRLDARLNRIP
SAGLRPEAFQDLTQLQFLHLSDNQLDYIPAPLPESLRSLHLQNNNIQTMHEDTFCNSQDQ
SHIRRALEDIRLDGNPINLSLFPNAYFCLPRLPTGRFL
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggctttagggcacaggatgcagactctggcctgggtgggcatcgccagcctgtgtttg
ggagcaacctgggctgtcccagccaagaaggaaaggaagaaggtggagaagccaaaacct
gaccttgtgctttatgaaaacctggatctggagaactatgacatgactctggacagctat
ggggacatcatggacctgaacaactatgaggagctctatgactatggtgacctggctccc
aagatcgaggttgggactctggctcctcgccccaaggaccgcgggactctgccagagctg
ggcacagcagctccaacacccaagttgcagcctctggccaccaccaatcccacccgccca
gcaccactggggcccaacactgcgcagggcctccccagctgcttgcgctgcctctgcatc
agaacctccgtgtactgcgatgacaccgacctggagcacatcccacctctgccgcccgac
accacctacctgtacgcccgcttcaaccgcatcggtgccatccgggctggcgatttcatg
gggctgaagaaactgaagcgaatagacctgacgagcaattccatctcctgggcagacgtg
gatgctttccgtctcctccccagcctgcaggagctcatcctgcctgagaacaggctgaca
gctcttcccgagctgccccgcagcatcgtcaggctggatgcccgcctcaacaggatcccc
agtgctggtctccggcccgaagctttccaggacctcacgcagctgcagtttctccatctg
tctgacaaccagctggactacatccctgcacccctgccagaaagcctacgctccctgcac
ctccagaacaacaacatccagaccatgcatgaggacacattttgcaacagccaagaccag
agccacatccgcagggcgctggaggacatccgccttgatggcaaccccatcaacctcagc
ctcttccccaatgcctacttctgcctgccccgcctgcccacgggacgcttcctctga
DBGET
integrated database retrieval system
