Tympanuchus pallidicinctus (lesser prairie-chicken): 128088199
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Entry
128088199 CDS
T08967
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128088199 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpai03021
]
128088199 (CPSF3)
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128088199 (CPSF3)
Transcription machinery [BR:
tpai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
128088199 (CPSF3)
Messenger RNA biogenesis [BR:
tpai03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
128088199 (CPSF3)
U7-dependent histone pre-mRNA processing factors
128088199 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
128088199
NCBI-ProteinID:
XP_052554443
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MPPGGRGREAEGRPAVRSAPSRWGSAAPARAALRSGSEGTSRPLPAWCFGSQGGAGQEVG
RSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFL
QKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVK
EVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIE
STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH
DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSV
VMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPL
KMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIE
VHNPRNTEAVTLNFRGEKLAKVMGSLADKKPEQGQRISGILVKRNFNYHILSPCDLSNYT
DLAMSTVTQTLAIPYTGPFNLLFYQLQKLTGDVEEIEIQQKPALKVFKSITVIQEPGMVV
LEWVANPANDMYADTVTTVILEVQSNPKIQKAAVQKVSTKVDMEEYRKRMEMMLQDMFGE
DCVSSKEGSILCVTVDGKTANLSLETRTADCEPGSEDDESLREMVELAAQRLYDALSPVY
C
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggggggacggggccgggaggcggagggccggccggccgttcggagcgctccg
tcgcggtgggggagcgccgctccggctcgagcggccctcaggagcggctcggaaggaacc
tcgcgacccctgcccgcctggtgcttcgggagtcagggaggagctggccaagaagtagga
agatcatgcattattctggagttcaaaggaaggaaaataatgcttgattgcggcatccat
cctggactggaaggaatggatgctcttccttacattgacttgatagaccctgctgagatt
gacctccttctgattagccatttccatttagatcactgtggagctttgccatggtttttg
cagaagacaagttttaaaggaaggacgtttatgactcatgccacaaaagctatttacaga
tggcttctttcagactatgtcaaagtcagtaatatatcagcagatgacatgctgtataca
gaaacagacctggaagaaagcatggataagattgaaaccatcaactttcatgaagtgaag
gaggtggcaggcatcaagttctggtgttaccatgcaggccacgttctgggagcagccatg
ttcatgattgaaatagctggtgtgaagcttttgtatacaggtgatttctcaagacaggaa
gacagacatctgatggcagccgagattcccaacattaaacccgatattctgataattgaa
tccacctacgggactcatatccatgagaagagggaagagcgagaggcccggttctgcaac
accgttcacgacattgtaaatagaggagggagaggcctcattcctgtgtttgccctgggt
cgggcacaagagctgcttttaattttggatgaatactggcaaaatcatcctgagctccac
gacatccccatttactatgcctcctctctggctaagaagtgcatggctgtttatcagaca
tacgtcaatgccatgaatgacaaaatccgcaagcaaatcaacatcaacaatccatttgtt
ttcaagcatattagcaatctgaagagtatggatcattttgatgatattggcccaagcgtt
gtgatggcttccccaggtatgatgcagagtggtttatccagagagctgtttgagagctgg
tgcacagataagagaaatggagtaattatagctgggtactgtgttgaaggaacgctcgct
aagcatatcatgtctgaacctgaagagatcacaactatgtcagggcaaaaactgccgctg
aagatgtctgtggattacatttctttctctgctcacacggattaccaacaaaccagtgag
tttatccgggccttgaaacctccacatgtgattttagttcacggtgagcagaatgaaatg
gccagattgaaggcagcactgataagggaatatgaagataacgacgaagttcacatagaa
gttcataatcctaggaatactgaagctgtgacattaaacttcagaggagaaaaacttgca
aaggtgatgggatctttggcagataagaagccagagcaaggacagagaatttctggaatc
ctggtcaaaagaaattttaactatcacatcctttctccatgtgacctctccaattataca
gacttggctatgagcactgtaacacagacactggctattccctatactggacctttcaat
ctgctcttttatcagctgcagaagcttactggtgatgtagaggaaatagaaattcaacaa
aaaccagccctgaaggtcttcaaaagtattactgtaatccaggaaccaggcatggtggtc
cttgagtgggtggcaaatcctgctaatgacatgtatgcagacaccgtgaccacagtgata
ctggaagttcagtcaaatcctaaaatacagaaagctgcagtgcagaaagtttccacaaaa
gtcgacatggaagagtatcgcaagagaatggaaatgatgcttcaggatatgtttggagaa
gactgtgtaagttcaaaagaaggctcaattctgtgtgtcacagtagatggcaagactgca
aacctttcactggaaactcggacagctgactgtgagccaggaagtgaagacgacgaatcc
cttcgtgaaatggtggaactggctgcacagaggctctacgatgccctcagcccagtgtac
tgctga
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integrated database retrieval system
