Tympanuchus pallidicinctus (lesser prairie-chicken): 128088220
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Entry
128088220 CDS
T08967
Symbol
NFASC
Name
(RefSeq) neurofascin
KO
K06757
neurofascin
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128088220 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tpai04515
]
128088220 (NFASC)
Cell adhesion molecules [BR:
tpai04515
]
Immunoglobulin superfamily
L1 family
128088220 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_5
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
128088220
NCBI-ProteinID:
XP_052554483
LinkDB
All DBs
Position
Unknown
AA seq
1357 aa
AA seq
DB search
MVLHSHQLTCAGIAFALCLQHLINAIEVPLDSSIQSELPQPPTITKQSVKDYIVDPRDNI
FIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHGGGRPDDYEGEYQCF
ARNDFGTALSSKIHLQVSRSPLWPKEKVDVIEVDEGSPLSLQCNPPPGLPPPVIFWMSSS
MEPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTKKPH
NETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYK
KGGELPVGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDE
PQNLILAPGEDGRLVCRANGNPKPSIQWLVNGEPIEGSPPNPSREVAGDTIVFRDTQIGS
SAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIKVIQYNRTRLDCPFFGSPIPTL
RWFKNGQGNTLDGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKAEAQVRLEVKDPT
RIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKEDDGLTIYGV
AEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRELPKERPDRPRDLELSDLAERSVK
LTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHSRYPGNVNSAVLSLSPYVNYQFRVIAV
NDVGSSLPSTPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIV
RWRRRDPRGSWYNETVKAPRHVVWNTPIYVPYEIKVQAENDFGRAPEPETYIGYSGEDYP
KAAPTDVRIRVLNSTAIALTWTRVHLDTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQYVS
FPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEVKEFPTPEGVPSSPRYLRIRQPNL
ESINLEWDHPEHPNGVLTGYNLRYQAFNGSKTGRTLVENFSPNQTRFTVQRTDPISRYRF
FLRARTQVGDGEVIVEESPALLNEATPTPASTWLPPPTTELTPAATTATTTAIPTTETPP
TEIPTTAIPTTTTTTTTTAASTVASTTTTAERAVAATTKQELATNGSSIWDIRAWANSNW
ANITWSHNYSAGTDFVVKYITSNKTEKSIPVKAQTPSSVQLANLTPGMVYKLWVFPIWSS
PSEHSYITFTTSSAYTKNHVDIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVRD
NKDEHLNPEDKNVEDGSFDYSDEDNKPLPNSQTSLDGTIKQQESDDSLVDYGEGGEGQFN
EDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgcacagccaccagctcacctgtgcagggattgcatttgctctgtgcctccaa
cacctcatcaacgccatcgaagtccctctggattcaagtattcagagtgaattgcctcag
ccccccaccatcaccaagcagtctgtgaaggactacatcgttgacccccgagacaacatc
ttcatcgaatgtgaagccaaagggaatcctgttcccaccttttcctggacacggaacggg
aagttcttcaacgtggcaaaggaccccaaggtgtccatgaggaggcggtcggggacgttg
gtcattgatttccatggaggtgggcggccagacgactacgagggcgaataccagtgcttc
gccaggaacgattttggcactgcactgtccagcaaaatccacctccaggtgtccagatct
cccctgtggcccaaggagaaggtggatgtcattgaggttgacgaaggttctccactcagc
ctgcagtgcaacccgcctcctggtctgcctcctcctgtcatcttctggatgagcagctcc
atggagcccatccaccaggacaagcgtgtctcccagggccagaacggtgacctgtacttc
tccaatgtcatgctgcaggatgctcagactgactacagctgcaatgcacgattccacttc
acccacaccatccagcagaaaaatccctacaccctcaaggtgaaaaccaagaaaccccat
aacgaaacgtccttacgaaatcacactgacatgtacagtgcccgaggggttacagaaaca
acacccagcttcatgtacccatacgggacctccagcagccagatggtgctccgaggggtg
gacctgttgctggagtgcattgcatcaggagtaccagcaccagatatcatgtggtacaag
aaaggaggtgagctcccagtgggcaaaaccaagctggaaaactttaacaaggcccttcgt
atctccaacgtctcggaggaagactctggggagtatttctgcctggcatccaacaagatg
ggcagcatccgccacacgatctcggtgagagtgaaggctgccccttattggctggatgag
ccacagaatctcattttggcccctggtgaggatggcaggttggtgtgtcgagccaatggg
aaccccaagccttcaatccagtggttggtgaatggagagcccattgaaggttctccaccc
aacccaagcagagaggtggctggagataccattgtgtttcgagacacgcagatcggcagc
agcgctgtgtaccagtgcaatgcttccaacgagcacggctacctccttgccaatgccttt
gtcagtgtcctggatgtgccaccacggatactggcccctcgcaaccagctcatcaaagtc
atccagtacaacaggacccggctggactgccccttctttggctcacccatccccaccctg
cgatggtttaagaatggccaggggaacacgctggatggagggaactacaaagcacatgag
aacgggagcttggagatgagcatggctcggaaggaggatcagggcatctacacctgtgtt
gccaccaacatcctgggcaaagctgaggcccaggttcgcctggaagtcaaagaccccacc
aggattgtgagaggccccgaagatcaggtggtgaagaggggctccatgcctcgcctgcac
tgccgcgtgaagcacgacccaacgttgaagctgacggtcacctggctgaaggacgacgct
cctctctacattgggaacaggatgaagaaagaagacgatggtctgacgatatacggcgtg
gctgagaaggatcagggtgattacacctgcgtggccagcacggagctggacaaggactca
gctaaagcctacctcaccgtgctagcaatccctgctaaccgtttgagagagttacctaaa
gagcgacccgaccggccacgggacctggagctgtcagacctggctgagaggagcgtgaag
ctgacgtggattcctggagatgacaacaacagtcccatcacagactacatcgtccaattt
gaggaggaccgattccagcccggcacgtggcacaaccactccaggtatcctgggaatgtc
aactcggccgtcctgagcctctctccttacgtcaactaccaatttcgggtgattgcagtg
aacgacgtgggcagcagcctgcccagcacgccttcggaacgataccagaccagcggtgca
cgacctgaaattaacccaacgggagttcaaggagcagggacccaaaaaaacaacatggag
ataacctggacgcctctgaacgcaacgcaggcatatgggcccaacctgcgttacatcgtg
cgatggaggcggagggacccacgtgggagttggtacaacgagacagtgaaggcgccacgg
cacgtcgtctggaacacacccatctacgtcccctacgagatcaaagtgcaggcagagaat
gactttggtagagcaccagagcctgagacctacatcggctattcaggggaagattatccc
aaggctgcacctacggatgttaggataagagttctaaacagcactgccattgctctgaca
tggacccgtgtgcacctggacaccatccagggacagcttaaggagtacagagcctatttc
tggagagacagtagtttgctgaagaacctgtgggtctccaaaaaaagacagtatgtgagt
tttcctggagaccgaaaccggggcatagtgtcccggctgttcccttacagcaactacaag
cttgagatggttgtaaccaacgggagaggcgatgggccccgcagcgaagtcaaggagttc
cccacacctgaaggagtgcccagctcccccaggtacttaagaatccgacagccaaatctg
gaaagcatcaatttggagtgggatcacccagaacaccccaatggagtcctcacaggatac
aaccttagataccaagcctttaacggatccaaaacgggcagaaccctggtagagaacttc
tctcccaaccagacaaggttcaccgtgcagaggacagaccccatctcgcgctatcgattc
ttcctgcgtgctcggacacaggtgggagatggagaagtcatagtggaagagtcaccagca
ctgctgaatgaagccacgccaaccccagcctccacctggttgcctccacctacaactgag
ctaactccagcagccaccactgccaccaccaccgccatccctactactgaaacccctcct
actgaaatccctactactgccatccctaccaccaccactactacaaccaccacagctgcc
agcaccgtcgcaagcactacaacaactgcagagagggctgtggcagccaccacaaaacag
gagctggccaccaatggatcgtccatatgggacataagagcttgggctaatagtaactgg
gcaaacatcacctggagccacaattactctgcaggaactgactttgtggttaagtatatc
accagtaacaagacagagaaatctatccccgttaaagctcagaccccctcctctgtgcag
ctggccaatctgacgccggggatggtgtacaagctgtgggtgttccccatatggtctagc
cccagcgagcattcgtacataacctttaccaccagctcagcttacaccaagaaccatgtg
gacatcgcgacccagggctggttcattgggctgatgtgtgccatcgctctcctggtcctc
attctgctgattgtttgcttcattaagaggagcagaggagggaaatacccagtgcgtgac
aacaaagatgagcacctgaaccctgaggacaagaacgtagaagatggctcgttcgactac
agtgatgaagacaacaaaccactgcccaacagccagacatccctggatggcacgataaag
cagcaggagagcgacgacagcttggtggactacggagagggtggggaagggcagttcaac
gaggacggctccttcatcggccagtacacggtgaaaaaggacaaggaggagacagaaggc
aacgagagctcggaagccacatccccagtcaatgctatctattcattagcatag
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