Tympanuchus pallidicinctus (lesser prairie-chicken): 128088351
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Entry
128088351 CDS
T08967
Symbol
ZC3H12A
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128088351 (ZC3H12A)
Messenger RNA biogenesis [BR:
tpai03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
128088351 (ZC3H12A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
128088351
NCBI-ProteinID:
XP_052554746
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MSAGSLSSLLGCPGWREAFPVFRQQFSRLEERMSSRDPCESGYLSLGRALSCEEGVGPAV
LGMEPVGSPAQEPPDSLEMQLKVDFFRKLGYSSEEIYVVLQKLGLNADTNTVLGELVKHG
PAEREPTETPQETKEAPLVPRGGAANKTPAPVPPLEEKESDNLKPIVIDGSNVAMSHGNK
EVFSCRGILLAVQWFWDRGHKDITVFVPSWRKEQPRPDVLITDQYILRDLEKKKILVFTP
SRRVGGKRVVCYDDRFIVKLAHESDGIVVSNDTYRDLQNERPEWKKFIEERLLMYSFVND
KFMPPDDPLGRHGPSLDNFLRKKPVVPEHKKQQCPYGKKCTYGIKCKFYHPERINQPQRS
LADELRANARLSPTRSTSAVKEEKKGKRGSQAELLCSGSTESDKSSLQKISAERKSLTHK
TKPNDVPLQIKGCVSGSAPANSGSHRSSERYQHPHMDSLSYISQEHLDSGIGSLENQMSD
MWPYRSTSHCDHSHAEQVTVCSCGRQRPVYPHSPSLEQNGLVSYKHGSHKSSASGASFLQ
YNPEIPHSGPPHSFSGYGVPVHPANAGQYSLPSEYNAPSLPSLHSREYWSEPYQMPPPQV
RSTSVRDPHSVQRAPGPTYGDSCQWSVSDQFAEERANVHVKLCGIFHPHLVDAVMSRFPQ
LLDPQKLAAEILTYKSQNPGI
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgggcagcttgtcctccctgctgggctgccccggctggcgtgaggcgttccca
gtgttcagacagcagttcagtcggctggaggagaggatgagctccagagatccatgtgag
agtggttacctcagcctgggccgggctctgagctgtgaggagggggttgggcctgctgtg
ctgggcatggagcccgtggggagccccgcacaggagccccccgacagccttgagatgcag
ctgaaggtggacttcttccgcaagctgggctactcctccgaggagatctacgttgtactc
cagaagcttggtctgaatgctgataccaacactgtcctcggggagctggtgaagcatggc
ccggctgagcgagagcccacagaaacccctcaggagaccaaggaagctcctttggtccct
cgaggaggagctgccaacaagactcctgcacctgtgccacctctggaggagaaggagagt
gataacctgaagcccattgttattgatggaagcaacgtggcaatgagccatggaaataaa
gaggtgttctcctgcagaggaatccttctggctgtgcagtggttttgggacaggggacac
aaggatattacagtgtttgtgccatcttggaggaaggaacagccacgaccagatgtactt
ataacagatcagtacattctccgtgacctggaaaagaagaagattttggtcttcactcct
tccagacgggttgggggcaaacgtgttgtctgctacgatgatcgattcattgtgaaactg
gcacacgagtctgatggcatcgtggtttctaatgatacttatcgggacctgcagaatgaa
cgtcctgagtggaagaaattcattgaggagcgtctgctgatgtattcctttgttaatgac
aagtttatgcctccagatgatccattggggcggcatggccccagcctggataactttctg
agaaagaaacctgtggtgccagaacacaagaagcagcagtgcccttatgggaagaaatgt
acttatggaattaagtgtaaattctaccaccctgaaaggatcaatcaaccccagcgctca
ttagctgatgaactccgtgccaatgcaagattgtctcctaccagaagtaccagtgctgtc
aaggaggagaaaaagggcaaaagaggctcccaggcagagctcttgtgctctgggtctaca
gagagtgataaaagctctttgcagaagatctctgcagagaggaaaagcttgacacataaa
acaaagcccaatgatgttccgcttcagatcaaaggctgtgtgtcaggcagtgctcctgct
aacagtgggagccacaggtcctctgaaaggtaccagcatcctcatatggactctctgtct
tacatctctcaggagcatcttgactcaggcattgggtctctggagaaccaaatgtctgac
atgtggccttacagatctaccagtcactgtgatcactcccatgccgagcaggtgacagtc
tgctcctgtggtaggcagagacctgtctacccacactctcccagcttagagcaaaacggt
ctggtctcttacaagcatggttcccataaatcttctgcctctggtgctagcttcttgcag
tacaaccctgagatacctcactcagggccacctcactctttctcaggctatggggtacct
gtccatccagctaatgctgggcagtacagtctccccagtgagtacaatgccccttctctt
ccttcacttcattctcgtgagtactggtctgagccctaccagatgcctcctccccaggtg
agatctaccagcgtgcgagatcctcactcagtgcagagagccccagggccaacgtatggt
gattcctgccagtggagtgtctctgatcagtttgcagaggagagggccaatgttcatgtc
aagctgtgtggcatattccatccccatttagttgatgctgtgatgagccgtttccctcag
cttttggatccccaaaagcttgccgcagagatattaacctacaaatcccagaacccaggt
atatga
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