Tympanuchus pallidicinctus (lesser prairie-chicken): 128088477
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Entry
128088477 CDS
T08967
Symbol
VPS54
Name
(RefSeq) vacuolar protein sorting-associated protein 54
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpai01009
]
128088477 (VPS54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128088477 (VPS54)
Protein phosphatases and associated proteins [BR:
tpai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128088477 (VPS54)
Membrane trafficking [BR:
tpai04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
128088477 (VPS54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
SBP_bac_6
Motif
Other DBs
NCBI-GeneID:
128088477
NCBI-ProteinID:
XP_052555037
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MASSHSSSPVPQPNSSDAFFKKEKDVAKRFQPVQSLPDVCPKEPTGDASSLCDSPSLVAD
QHRWTIYHSKVNLPAALNDPRLAKRESDFFTKTWGVDFVDTEVTPSFYLPQITKEHFALY
QQEIAPREKVHERCKNICPSKDTFDRTLLHTYDKSRTDLEQVPKIFMKPDFALEDSLTFN
AVLPWSHFSTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLRKTSQAVKLLREKISKIDKVMCEGSLRVLRLSLTRNNCIKAYNKLKLMATVHQTQ
PTVQLLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
YARNDLNRPLEDDCQILEEERLVSLVFGLLKQRKLNFYEIYGDEMIITAKNIIKQCVVNT
VSQIEEIDTEVVVKLADQIRMMNFPQWFDLLKDIFSKFTIFLKRIKATLNTIRSVVLLVL
DKNQRTRDLEDTLQKNSVKDSPLDTEVAYLTHEGMFISDAFGEGDLPLVAADTTSQRNTS
PNSEPCSSDSVSEPECTTDSSSSKEPTSSVTPGVEMMISDDMKLTELELGRLANNIQELL
YNASDICHDRSVKFLMARAKGGFLEKLNSNEFVALSRLMEGFILDTEQICGRKSMSLRGA
LQSQANKFVNRFHEERKTKLSLLLDNERWKQAEVPAEFQDLVDSVSDGRISLPEKKPTGA
EERKPTEFLIVEGQKYATVGTVLLLIRIILEYCQCVDNIPSITTDMLTRLSDLLKYFNSR
SCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPIIRAHFEARLQPKQFSMLRHF
DHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEAIYD
LLPEEQTQILFLRINASYKLHLKRQLAHLNVVNDGGPQNGLVTSDVAFYTGNLQALKGLN
NLDLNMAEIWEQKR
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagccacagttcttcaccagtgcctcagccaaacagcagcgatgctttcttt
aaaaaggaaaaggatgttgcaaaacgcttccagcccgtgcagtcactgcctgatgtgtgt
cccaaggagcctacaggcgatgccagtagtttatgtgacagcccgtctctagttgcggat
cagcacagatggactatttatcattccaaagtcaatctcccagcagcactaaatgatcct
aggttagcaaaaagggaatctgatttctttacaaaaacatggggagtggactttgtggac
actgaagtcacgccttcattctacctcccacagatcaccaaggaacattttgcattatac
caacaggagatcgctccgagagagaaagttcacgaaagatgcaagaatatttgtccttct
aaagataccttcgacaggactctattacacacctatgataaatccaggacagatctggaa
caagtacctaagatttttatgaaaccagattttgccttggaagattccttaacgtttaat
gccgttttaccatggtctcattttagtactgctggtggaaaaggaaatcgtgatgcagct
tcctccaagttacttcaagaaaagctgagccattatctggacattgtggaagtcaatatt
gctcatcagatttctctacgctctgaagcattttttcatgcaatgacctctcagcatgag
ttacaggactacctcaggaaaacctcccaggctgtaaaattacttagagagaaaatctcc
aaaattgataaagtaatgtgtgaaggctctcttcgagttttaagactgtcgctcaccaga
aataattgtataaaagcatacaataaactgaagttaatggctactgtacaccaaacgcag
cccacagtacagttgctactgtctacttctgagtttgttggagctttggacttgatagca
acaacgcaggaggtgttgcagcaggaacttcaaggcattcacagtttccggcaccttggc
tcacagctctgcgaactggaaaagctgatagataaaatgatgattgcagagttttcaacg
tacgctcgcaatgatttaaatagacccctagaagatgattgccaaattctagaagaggag
agacttgtatcactagtatttggacttttaaagcaaaggaagctaaatttttatgaaata
tatggagatgaaatgattattactgcaaagaatataataaaacagtgtgtggttaatacg
gtatcgcagatagaagaaatagatacagaagtggttgttaagcttgcagaccagataaga
atgatgaattttcctcagtggtttgatttattgaaggatattttttctaagtttactatc
ttcctcaagagaataaaggcaacgttaaatactatccgtagcgtggttctcttggttcta
gacaagaaccaaagaaccagagacctggaggacaccttgcaaaagaactctgtgaaagac
agtcccttggacacagaagtggcttacctgacacacgaaggcatgtttataagcgacgcc
ttcggcgagggggacctcccacttgtagcagctgacactacctctcagagaaacacttct
cccaacagcgagccctgtagcagtgattcagtctctgaaccagagtgcactacagactct
tcgtccagcaaggagccaacgtcgtctgttactccgggagtggagatgatgatcagcgat
gacatgaagttgactgaactggaactgggcaggctggcaaataacattcaagagttgttg
tataatgcttctgatatctgccatgatcgttcagttaagttcctcatggcaagagcaaag
ggtggcttcctagagaagctgaattccaatgagtttgtcgctctttctcgcttgatggaa
ggctttatcttagatactgagcagatctgtggcagaaaaagtatgtccttgcgaggagca
cttcaaagtcaagccaataaatttgtgaataggttccatgaggagaggaagacaaagcta
agcctgctcttggacaacgagcgctggaagcaagctgaagttcctgccgagtttcaggat
cttgttgattctgtgtcagatggcagaatttctctccctgaaaaaaaaccaacaggtgct
gaagaaaggaagccaactgaattccttattgttgaaggacaaaaatatgcaacggttggg
acagtattgctgttaataagaataatcctggagtactgccagtgcgtggataacattcct
tccatcaccaccgacatgctcacccgcctgtctgatttactgaagtatttcaactctcga
agctgccagctggtgcttggagccggtgcattacaagttgttggattgaaaacaatcact
acaaaaaatttagccctttcttcacgttgcctacagctaatcgtacactacattcctatt
atcagggctcattttgaagctcggctgcagccaaagcagtttagcatgctcaggcacttt
gaccacattacaaaggattatcacgaccacatagctgaaatctcagcaaagctcgttgcc
atcatggatagcttatttgacaaactgttatccaagtatgaagtgaaagctcctgttcct
tcagcatgcttcagaaatatctgcaagcaaatggcaaagatgcatgaagctatatatgat
ctccttcctgaggaacaaactcagatcttgtttttaagaattaatgcaagctacaaactt
catctgaaaaggcagctggcccatctaaatgtagtcaatgatggaggacctcagaatgga
ctggttacgtcagatgtagctttctacactggaaaccttcaagctctgaaaggccttaac
aacttagacctaaacatggctgaaatttgggagcagaagaggtga
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