Tympanuchus pallidicinctus (lesser prairie-chicken): 128088479
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Entry
128088479 CDS
T08967
Symbol
SDC3
Name
(RefSeq) syndecan-3 isoform X1
KO
K16337
syndecan 3
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04514
Cell adhesion molecules
tpai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128088479 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128088479 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tpai00535
]
128088479 (SDC3)
Proteoglycans [BR:
tpai00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
128088479 (SDC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
128088479
NCBI-ProteinID:
XP_052555035
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MGFLFSGTSLPAAQLLGMLQGSDALAQRWRNENYERPVDLEGSGDDDPFGDDELDDIYSG
SGSGYFEQESGLETAVSLTADTSIPLPTTVAMLPVTLVQPVATPFELFPTEDTSPEQTTS
VLYIPKITETPVIPSWKTTTTSPTASDSPSTTATTTTAATTTTTTTTISTTVATAKPTTT
QRFLPPFVTKAATTQATTLETPTTSIPETSVPTEVTTSRLVPSSTAKPRSLPKPTTSRTA
EPTEKSTALPSSPTTLPPTEAPQVEPGELTTVLGSDLEVPTSNGPSGDFEIQEEEETTRP
ELSNEVVAVVTPPAAPGLGKNAEPGLIDNTIESGSSAAQLPQKNILERKEVLIAVIVGGV
VGALFAAFLVMLLIYRMKKKDEGSYTLEEPKQANVTYQKPDKQEEFYA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggggtttctcttttctggtacctcccttcctgcagcccaactgctggggatgctccaa
ggttcggatgctttggctcagcgctggcgcaatgagaactatgagaggccagtggacctg
gagggctccggggacgatgatcccttcggggatgatgaactggatgacatctactcgggc
tccggctcaggctattttgagcaggagtcggggttggagacagcagtcagcctcaccgcg
gacacatccatccctctgcccaccacagtggccatgctgcctgtcaccttggtgcagccc
gtggcaactccctttgagctgttccccacggaggacacgtcccctgagcaaacaaccagc
gtcttgtatatccccaagataacagaaacaccagtgatccccagctggaaaacaaccacc
accagtcccactgccagtgactctcccagcaccacagccaccaccaccacggctgccacc
accaccacaaccaccaccaccatcagcaccaccgtggccaccgccaagcccaccacgacc
cagaggttcctgcctccctttgtcaccaaggcagccaccactcaggccaccaccctggag
acacccaccacctccatccccgaaaccagtgtgccgacagaggtgaccacatcacggctt
gtcccctccagcacggccaagccgagatccctgccaaagccaaccacctccaggactgca
gaacccacggaaaaaagcactgccttgccttccagtcccaccacgctgccacccacagaa
gccccccaggtggagccaggggagttgacgacggtcctcggtagtgacctggaagtccca
accagtaatggccccagcggggacttcgagatccaggaggaggaggaaacaactcgtcct
gagctgagcaatgaggtggtggcagtggtgacaccaccagcagcaccagggctgggcaag
aatgcggagccggggctcatcgacaacacgatagagtcgggcagctcagctgctcagctc
ccccagaagaacatcctggagaggaaggaagtgttgatagctgtgatcgtcggcggtgtg
gtaggagccctctttgctgccttccttgtcatgctgctcatctaccggatgaagaagaag
gacgagggcagctacacattggaggaacccaaacaagccaacgtgacctaccagaagccg
gacaagcaggaggagttctacgcgtag
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