Tympanuchus pallidicinctus (lesser prairie-chicken): 128088579
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Entry
128088579 CDS
T08967
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03013
Nucleocytoplasmic transport
tpai05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128088579 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
128088579 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128088579 (NUP98)
03036 Chromosome and associated proteins [BR:
tpai03036
]
128088579 (NUP98)
Messenger RNA biogenesis [BR:
tpai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128088579 (NUP98)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128088579 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
128088579
NCBI-ProteinID:
XP_052555222
LinkDB
All DBs
Position
Unknown
AA seq
1814 aa
AA seq
DB search
MFNKSFGTPFGGNTGFGTTSTFGQNAGFGTTGGGAFGTSAFGANSNTGGLFGNTQAKPGG
LFSSNAFNQPATSSTSTGFGFGTSTGTSSSLFGTTSTGGGLFSSQSNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGNPSGSLFGPTSFTAAPTGTTIKFNPPTGTDSMVKSGVST
TINTKHQCITAMKEYESKSLEELRLEDYMANRKGPSNPVGAGATTGLFGTSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTTTTGFGTGTTGGLFGQQTQTTSLFNKPFGQATTTQNTG
FPFGNTSTLGQPNTSTMGIFGATQPSQPGGLFGTAATTNAGTAFGTGTGLFGQANTGFGV
GGSTLFGSKPAGFGTTTTSTSFGTTTGGGLFGNKPTLSLGTNTNTSNFGFGANNAGNSLF
GNKPATGTLGTGLGTGFGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGFG
APQPAVALTDPNASAAQQAVLQQHLNNLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAA
QKALTTPTHYKLTPRPATRVRPKALQSAGSAKSQLFDGLDDDEPSLANGAFMPKKSIKKL
VLKNLSGSSLFSPVNRENDDLASPSEYPENGDRFFLSVPPDENHRQDGEREEEEEHHEVT
RFYTNPIAKPIPQSPENTAHKHQNSVDDTIVALNPRAALRNGLEGSSEDPSFHDDSLQDE
REDEAEAVPHVHPAGIVLTRAGYYTIPSMEELAKFTNDKNECIVTDFTIGRKGYGSIFFE
GEVNLTNLNLDDIVHIRRKEVIVYPDDERKPPIGEGLNRRAEVTLDGVWPTDKTSRGLIK
SPERLAEMNYEGRLESVSRKQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEHPLK
VDAKKLKTTPVPPPGHLPPQQTALNGKPAPPAQSPEVEQVGRVLELDSDMADVTQEPPQE
PAVQDSMAEELEAVPASAHIASTLGINPHVLQIMKASLLADEDDLDLILDHHAGKQPTKM
DTSQEICSPRLPISKSQGQKRCSVAGLLQSKFADTIFQPPSTALHDLQEPRASRSSPSPA
CWSASSPLASAFAVPPSVPEVQMRTVGVRRQQGLVPLESSITYGKGKLLMDTALFMGRAF
RVGWGPNWTLVNCGDQLSGSRGMEDLPCEAAEYGFLPAPVAPKILPESPFKVHLEKLNLE
QRKMNRDKQLYLIPLEIKLKHSTVHMDEQCPLLAPNPGVSAIHDYADWVRTASEDPAVME
TVVKHWCLTWTLCEAIWGNLKELEASLEEPSEYVLALERRRAFSRWLSETAAARIDEEVA
LTQHHNRVEAVFSCLTGRRIGEACRLAQQAGNHRLALLLSQLVGSQPTRDLLTMQLVDWH
RLQADCFIPEERLRIFALLAGKPVWQLSERTSINVCSQLDWKRCMAIHLWYLLPPTASIS
QALAMYEAAFQTTSESEKYACCPLPPYLEGSGCVIEEDDNAGRPLRDVCFHLLKLYSDRH
YDLDQLLDPRSITCDPMDYRLSWHLWEVLRALNYSHLCRQGQGVLNASYAAQLESEGLWE
WAVFVVLHEPDTHLREKAVRELLGRHCALCDSPESWAKETFLTQRLCVPAEWIHEAKAVR
ARMEGDKHKEALFLFKAGHWNQCHKLVVRHLASDAIINENYKYLKGFLEDLSPPERSALI
QDWELAGLVYLDYIRVIEMVDRIQQLDCSTYELERLHTKVTSLCNRIEQIQCHNARDRLA
QSDMAKRIANLLRVVLSLQHSPEPLADGGPELHLVPLRLLAPHVGRLPMPEDYALEELRG
LTQSYLRELTVVTH
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatccttcggaactccttttggaggtaacactggctttggaacaacatca
acttttggacaaaatgctggctttggtaccacaggtggaggagcgtttggcacgtcagcc
tttggggcaaacagcaacactggaggcctctttgggaacacccaggcaaagccaggaggg
ctcttcagttccaacgcctttaatcagcccgccacctcctccaccagcactggctttggc
tttggaacatccacaggaacatccagcagcctgtttggtaccaccagcactggtgggggc
ctcttctcatcccagagcaatgccttcgcacagaataaacctgctggctttggaaacttt
ggcacaagtaccagcagcggaggtctctttggaaccaccaacaccacttccaatcctttt
gggaatccatctggctctctgtttggcccaaccagttttactgctgctccgactggcaca
accattaaattcaatcccccaactggtacggatagcatggtcaagtctggagttagcacc
actatcaatactaagcaccaatgcatcactgctatgaaggagtatgagagcaaatctctc
gaggagctgcgtttagaagactacatggccaataggaaggggccctcgaatcctgtgggg
gcaggagccactacaggcttgtttgggacttccactgctacttcaagcacagctacggga
ctttttggctcttctaccactaatacaggcttctcctatggacagaataaaactgctttt
ggaactactacgactggctttggaacaggaacaacaggagggctttttggtcagcagact
caaacgacaagtctgtttaacaaaccatttggtcaggccacgacgacgcagaacacaggc
tttccctttgggaataccagcactcttggacagccaaacacgagcacgatgggtatcttt
ggggccacgcagccctcgcagcccggaggcctttttggaacagctgccactaccaatgct
ggcactgcgtttgggaccggaaccgggctttttggacaggcaaacacaggatttggtgtt
ggcggttcgaccctgtttggtagcaaacctgctggatttggaaccaccacgaccagtacc
tcatttggtacaaccactggcggcgggctctttggtaacaaaccaaccctgagtttagga
accaatacaaacacttccaattttggttttggtgccaacaatgctggaaatagcttgttt
ggaaataagcctgcaacggggactctgggaaccgggcttgggacagggtttggaacagcc
ctcggggcaggacagacttcattatttgggaacacccagcctaaactcggtgggacgctg
ggaacaggagcttttggagcaccagggttcaatacctccactgctactctgggctttgga
gcccctcagcctgctgtagcactgacagatcctaatgcatcggctgcccagcaggcagtc
ctgcagcagcacctcaataatttgacttattcaccctttggagattctccacttttcaga
aaccccatgtcggacccaaagaagaaagaagagcggctgaaaccgaccaaccctgcagct
cagaaggccttaacaacccccacccactacaaactgaccccgcgtccggcaaccagagtg
cgcccaaaggccctgcagtctgcaggctctgccaagtctcagctctttgatggcctcgat
gatgatgagccatccctggccaatggggccttcatgccaaagaagagcatcaagaagttg
gttttgaagaacctcagtggcagcagcctgttctctcctgtcaatcgtgagaacgatgac
ctggcatctccatcagagtacccagagaatggagacaggttctttttgtccgttcctcct
gatgaaaaccacaggcaagatggcgagcgcgaggaggaggaggagcaccacgaagtgacg
aggttttacaccaaccccattgccaagcccatcccccagagccctgagaacacagctcac
aaacaccagaacagcgtggatgacaccatcgtggccctcaatccgcgggcagccctgcgc
aacggcctggagggcagcagcgaggatccctcgttccacgacgattcccttcaggatgag
cgtgaagacgaggctgaggcggtgccccacgtgcatcctgcaggaattgttctaaccaga
gctggctattacaccatcccgtctatggaggagctggccaagttcaccaatgacaaaaat
gaatgtattgtgactgacttcaccataggccgtaaaggttatggatcgattttctttgaa
ggagaagtgaatctgaccaacctgaatctggatgacattgtgcatatccgtaggaaagag
gttattgtctacccagatgatgaaagaaagccacctattggtgaaggcctcaacagacga
gctgaagttacactggatggagtctggcctacagataaaacttctcgtggcttgataaaa
agcccagaacggctggcagagatgaattatgagggcaggctggagtctgtgtctcggaag
cagggcgctcgcttcaaggagtaccgccctgagactggatcctgggtgttcaaggtggca
cacttctccaaatacggcctgcaagattcagacgaggaagaggaagagcatcctttaaaa
gtggacgcaaagaagttaaaaaccaccccagtgcctcctcctgggcatctgccacctcag
caaacagccttaaacggcaagccagcgcctccagctcagagccccgaggtggagcaggtg
ggcagagtgctggagctggacagtgacatggcagacgtcacccaggagcctcctcaggag
cctgcagtgcaggacagcatggcagaggagctggaggcagtgcctgcttctgctcacatc
gcatcgacgctgggcatcaacccccatgtcttgcagattatgaaagcttccttgcttgct
gatgaagacgacctggatttaatcctggaccatcacgctgggaagcaacctacaaaaatg
gatacttctcaggagatctgttctccaaggctccctatctcaaaatcccaagggcagaag
agatgctcagtcgctgggctgctgcaatcaaagtttgctgataccattttccaaccaccc
agcactgctcttcatgacctccaggagccgagggcgtctcgcagctccccttcccctgcc
tgctggtcagcatcctctccgttagcatcagccttcgccgtccctccgtcggtccccgag
gtgcagatgaggacagtgggtgtccgcaggcagcagggcttggtccctctggagagctcc
atcacctatgggaaggggaagctgctgatggacacggcgctgttcatgggacgcgccttc
cgtgtgggctgggggcccaactggactctggtcaactgtggggatcagctgagtgggtcg
agggggatggaggacctcccatgtgaggctgcggagtatggattcctgcccgctcctgtt
gctccaaagatactcccagagtcccctttcaaggttcacttggagaaactgaacttggaa
caaaggaagatgaacagagacaagcagttgtatctcatccctctggagataaagctgaag
cacagcactgtccatatggatgaacagtgtcctctcctggctcccaaccccggagtttct
gctattcatgactatgctgactgggtccgaacagcatctgaggatcctgctgtgatggag
actgttgtgaagcactggtgcttgacgtggactttatgtgaagccatctgggggaacctg
aaggagctggaggccagcctggaggagcccagtgagtacgtgctggccctggagcgcagg
agggctttctctcgctggctgtcagagacagcagcggcacggattgatgaggaggttgct
ttgacccaacaccacaaccgtgtggaggctgtgttcagctgcctcacagggaggaggatt
ggagaagcttgcaggctggcacagcaggcaggcaaccaccggcttgccctgctcctctcc
cagctggtgggcagccagcccacgcgggacctgctcaccatgcagctggtggactggcac
aggctgcaggcagactgcttcatcccagaggagcgcctgcgcatcttcgctctgctggct
gggaagcctgtgtggcagttgtctgagagaaccagcatcaatgtgtgctcacagctggac
tggaagcgctgcatggccatccacctctggtacctcctgcctccaacagcttccatctcc
caggcacttgccatgtacgaggcagcatttcagaccacatcagagtctgagaaatacgcc
tgctgccccctgcctccttacctggaaggctctggttgtgtgattgaggaagatgataat
gcaggaagacctctcagagatgtctgtttccatttgttaaagctctacagcgacaggcac
tacgatctggaccagctgctggatcccaggagcatcacgtgtgaccccatggactatcgc
ctcagctggcacctgtgggaggtgctgcgtgccctcaattacagccacctatgcaggcag
gggcagggcgtgctgaatgccagctatgctgcccagctggagagcgaaggcctgtgggag
tgggctgtgtttgtggtgctgcacgagcctgatacccacctgcgtgagaaggccgtgcgg
gagctgctgggccggcactgcgctctgtgcgacagccccgagtcgtgggccaaggaaacc
ttcctgacacagcgcctctgcgtccctgccgagtggatccacgaagcaaaggctgttcga
gcgcggatggagggcgacaagcataaagaagccctgttcctgttcaaggccgggcactgg
aaccagtgccacaagttggttgtgcggcacctcgcatcagatgccattattaacgagaac
tacaaatacctgaaaggcttcctggaagatctctcccctccggagcgcagcgcactcatc
caggactgggagctggcagggctggtctacctggactacatccgtgtcattgagatggtg
gataggattcagcagctggattgttccacatacgagctggagcgcttgcacaccaaagtg
acgtcgctgtgcaacaggatcgagcagatccagtgccacaacgccagggaccgcctggct
cagtcagacatggccaagcgcatcgccaacctgctgcgcgtggttctcagcctgcagcac
agcccggagccgctggctgacggcggccctgagctgcacctcgtgcccctccgcctgctg
gccccccacgtgggccgcctgcccatgcctgaggattacgccctggaggagctgcggggc
ctcacgcagtcctacctgcgggagctgacggtggtcacgcactga
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integrated database retrieval system
