Tympanuchus pallidicinctus (lesser prairie-chicken): 128088587
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Entry
128088587 CDS
T08967
Symbol
TRIM3
Name
(RefSeq) tripartite motif-containing protein 3 isoform X1
KO
K11997
tripartite motif-containing protein 2/3
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpai04121
]
128088587 (TRIM3)
Ubiquitin system [BR:
tpai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128088587 (TRIM3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
SGL
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
TEN_NHL
zf-RING_2
Invasin_D3
RING_XB3-XBAT31
zf-C3HC4_4
zf-ANAPC11
Prok-RING_4
ANCHR-like_BBOX
Mala_s_1-like
zf-RING_11
ChuX_HutX
Motif
Other DBs
NCBI-GeneID:
128088587
NCBI-ProteinID:
XP_052555248
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MAKREANASPVVRQIDKQFLVCSICLDRYRNPKVLPCLHTFCERCLQNYIPPQSLTLSCP
VCRQTSILPERGVAALQNNFFITNLMEVLQRDPDSRGPHPGPGLDPVSAVTGQPLSCPNH
EGKVMEFYCESCETAMCRECTEGEHREHVTVPLRDVVEQHKAALQQQLDAIRGRLPQLAA
AIALVSEISQQLVERKNEAVSEIGSTFEELERALQQRKGLLVRDLEAICGAKQKVLQAQL
EVLRQGQENILSSCAFTEQALHHGTAPEVLLVRKQMSERLSALASQEFPEHPHENDQLDY
VVETDGVRKSILNLGVLITTSATAHKTVATGEGLRHAVVGQPASLSVTTKDKDGELVRSG
SACLRFVVTGPDGGAAESEVQDNKNGTYELLYTPRAEGDFQLSIALYGQPIRGSPFRVRA
VKASDVPPSPDDVKRRVKSPSSGHIRQKAVRRPSSMYSSGKKKENPIEDELIFRVGSRGR
EKGEFTNLQGISTSSTGRIVVADSNNQCVQVFSNEGQFRLRFGVRGRSPGQLQRPTGVTV
DMNGDIIIADYDNRWVSIFSPEGKFKTKIGAGRLLGPKGVAVDRNGHIIVVDNKACCVFI
FQSNGKLVTKFGSRGTAERQFAGTLDGPHFVAVNNKNEIVVTDFHNHSVKVYNADGEFLF
KFGSHGEGNGQFNAPTGVAVDANGNIIVADWGNSRIQVFDSAGSFLSYINTAADPLYGPQ
GLALTSDGHVVVADSGNHCFKAYRYLQ
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcgggaggccaacgccagcccggtggtgcggcagattgacaaacagttcctg
gtgtgcagcatctgcctcgaccgctaccgcaaccccaaggtgctgccgtgcctgcacacc
ttctgtgagaggtgtctccagaactatatcccgccccagagcctgaccctgtcctgcccc
gtgtgccgccagacctccatcctgcccgagcgcggcgtggcggccctgcagaacaacttc
ttcatcaccaacctgatggaagtgctgcagcgcgaccccgacagccgcggcccccacccc
ggcccggggctggaccccgtcagcgccgtcaccgggcagcccctgtcgtgccccaaccac
gagggcaaggtgatggagttctactgcgagtcctgcgagaccgccatgtgccgcgagtgc
accgagggggagcaccgggagcacgtcaccgtgccgctgcgcgacgtggtggagcagcac
aaggcggccctgcagcagcagctggatgccatccgcggcaggctcccgcagctggcggcc
gccatcgcgctggtgtcggagatcagccagcagctggtggagcgcaagaacgaggcggtg
tccgagatcggcagcaccttcgaggagctcgagagggccctgcagcagcgcaaggggctg
ctggtgcgcgacctggaggccatctgcggggccaagcagaaggtgcttcaggcacagctg
gaggtgctgcgccagggccaggagaacatcctgagcagctgcgcgttcacggagcaggcg
ctgcaccacggcacggcgcccgaggtgctgctggtgcgcaagcagatgagcgagaggctg
agcgctctggccagccaggagttccccgagcacccgcatgagaacgaccagctggactac
gtggtggagaccgacggcgtgcgcaaatccatcctcaacctgggcgtgttgatcaccacc
agcgccacggcgcacaagacggtggccacgggcgaggggctgcggcacgcggtggtgggg
cagcccgcttcgctcagcgtcaccaccaaggacaaggacggcgagttggtgcgcagcggc
agcgcctgcctgcgcttcgtggtgacggggccggacggcggcgcggctgagagcgaggtg
caggacaacaagaacgggacctacgagctgctatacacgccgcgcgccgagggcgacttc
cagctgtccatcgcgctgtacgggcagcccatccgcggcagccccttccgtgtgcgcgcc
gtcaaagccagcgacgtgccgccgtccccggacgacgtgaagcgccgcgtcaagtcgccc
agcagcgggcacatccggcagaaggcggtgcgccggccctccagcatgtacagcagcggc
aagaagaaggagaaccccatcgaggacgagctcatcttccgcgtggggagccgcgggcgg
gagaagggcgagttcaccaacctgcagggcatctccacctccagcacgggccgcatcgtg
gtggccgacagcaataaccaatgcgtgcaggtgttctccaacgaggggcagttccggctg
cgcttcggtgtgcgcggccgctccccggggcagctgcagcgcccgaccggcgtcaccgtg
gacatgaacggggacatcatcatcgctgactacgacaaccgctgggtcagcatcttctcc
cccgagggcaaattcaagacgaagatcggcgccgggcggctgctgggccccaaaggcgtc
gcggtggatcgcaacgggcacatcatcgtggtggacaacaaggcgtgctgcgtcttcatc
ttccagtccaacggcaagctggtcaccaagttcgggagccgcggcacggccgagcggcag
tttgcaggtacactcgatgggccacacttcgtggcggtcaacaacaagaacgagatcgtg
gtgacggatttccacaaccactcggtgaaggtgtacaacgcagatggagagttcctcttc
aagttcgggtcgcacggggagggcaatgggcaattcaacgcgcccaccggcgtggctgtg
gatgccaacgggaacatcatcgtggctgactggggcaacagccgcatccaggtgtttgac
agcgccggctcgttcctgtcctacatcaacacggcggcggatccgctgtacggcccgcag
ggcttggcgctcacctcggacggccacgtggtggtggcggactcgggcaaccactgcttc
aaggcgtaccgctacctgcagtga
DBGET
integrated database retrieval system
