Tympanuchus pallidicinctus (lesser prairie-chicken): 128088687
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Entry
128088687 CDS
T08967
Symbol
LCMT2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpai03016
]
128088687 (LCMT2)
Enzymes [BR:
tpai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
128088687 (LCMT2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
128088687 (LCMT2)
Transfer RNA biogenesis [BR:
tpai03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
128088687 (LCMT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LCM
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_3
Kelch_2
Motif
Other DBs
NCBI-GeneID:
128088687
NCBI-ProteinID:
XP_052555388
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MWGGAVRAARGRYAASAAPTSLRRGGSAREESGRALGAAGRGGAAKEARPLRRELCRKAA
GLRRGGARFVTRFVVPQVRGTGGSSAVSKCSAAERGYVRDRFVRLLAGRPRRRTALIHRG
YYVRARAVDHCVQDFLLKTRSHPRRQILSLGAGFDSLYFRLKDMDLLHHTVIYEVDFPSV
ACQKAALIKRTEELSALVGDAGAEGLGVTAAFSAKDYRLLGVDLSELPKLSAALDEAGLD
SEVPTLFIAEVVLTYMESSRSDALIQWAAEHFSHACFLLYEQMHPEDPFGRVMQQHFSQL
NSALRSLSQYPDCEAQQKRFLEKGWTECSVMDMNEFFTRCIPEDEQQRVQALEPFDEYEE
WHLKCSHYFVLTASKGMEPSWTPLLSNVAVPPHRGPVRLAGSISALACAAQSEVVGLRRY
GHHSALIKPNVILTTGGFGEENGHHCRMRSFHVLIKSAGSWQARCVKKENPDQGWDERLH
HTVSCLSDSLALVVGGRTSPSNAALGMLWLRFPKICNDSDPGDVTVEPVSLQPAAEPAAL
RWRHSTTEVIFKGEKYLFMYGGRSAVQPVLGDWCFLHIPEVSCATIAVEGPVPEGRHSHS
ACSWKGGALIAGGLGAAEQPLSSVFLLRETGRGFRWQMVETRPPLIPRYSHTAHVHDGKL
VLVGGVWFHSLCVPGITVIDLMTGLCLDYTINAEHLEWPLMLHNHSSVFLPDEKELLLIG
GGGNCFSFGTHLNPNPVSLNLSSILTSH
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcggagcggtgcgggccgccagggggcgctacgcagcgtccgcagcgcctacg
tcactgcgccggggcggttctgctcgggaggagtccggccgggctctcggggcggcaggg
agaggcggcgccgcgaaggaggctcggccgctccggcgggagctgtgccgtaaggcagcg
gggctgcggcgcggcggcgcccggttcgtcacgcggtttgtcgtcccgcaggtgcggggc
acgggcggcagcagcgccgtcagcaaatgctcggcggcggagcggggatacgtgcgggac
cgcttcgtgcggctccttgcgggccggccgcggaggagaactgcgctcatccaccgaggt
tattacgtccgtgcccgtgctgtagatcactgtgttcaagatttcctgctgaagaccaga
agtcatcctaggagacagatcctgtctctgggtgctggctttgactccttgtacttccgt
ttgaaagacatggatcttctacatcacactgtgatatatgaggtggatttcccaagtgtg
gcgtgccaaaaagctgctctgatcaagaggacggaagagttgtcagcactggtgggagat
gctggagcagaagggttgggagtcaccgccgccttttctgcgaaggattataggttattg
ggagtggatttatcagagctgccaaagctgagtgcagctctagatgaagcaggactggac
agtgaagtccccacccttttcatagcagaggtggtgctcacctacatggaaagcagcagg
tcagatgccttgattcagtgggcagcagagcatttctctcatgcgtgctttctgctgtat
gagcagatgcaccctgaggatccctttggacgtgtaatgcaacagcatttcagtcagctg
aactccgcacttcgttctttgtctcaataccctgattgtgaagcacagcagaagcgtttt
cttgaaaaaggctggactgagtgcagtgtcatggatatgaatgagtttttcacccgttgt
attccagaagatgagcaacaaagagtgcaggctctggagccttttgatgaatatgaggaa
tggcatctgaagtgttctcattactttgtcttgactgcatcaaaggggatggaaccctcc
tggactccattattatccaacgtggcagttcctcctcatcgtggccctgtcaggttggct
gggagcatcagtgcgttggcatgtgcagctcagtctgaagttgttggcttgagacgttac
ggtcaccactctgctcttataaaacctaatgtgattctgaccacgggaggctttggggag
gagaacggacatcactgtcgtatgaggagttttcatgttcttattaagtctgcaggctcc
tggcaagccagatgtgtgaaaaaggaaaatcctgatcaaggatgggatgagcgactgcac
catacggtgtcatgtctctcagacagcctggccctggtggtaggaggacgaacgtcccca
tcaaatgcagcgttgggaatgttgtggctgaggttccccaaaatctgtaatgactcagat
ccaggtgatgttactgtggagcctgtaagtctgcagcccgctgctgaaccagctgctttg
cgttggaggcacagcacaactgaagtaatattcaaaggagagaagtacctgtttatgtat
ggaggccgctctgctgtgcagccagtgcttggggattggtgtttcctgcacatcccagaa
gtttcctgtgctacgatcgctgttgagggcccggtaccagaaggccgccactcgcacagt
gcctgcagttggaaaggaggagcgctgatcgccggaggtctgggagcagccgagcagccc
ttaagttcagttttccttctgagggagacgggacggggcttccggtggcagatggtggag
acgcgccctcctctcatcccaaggtactcgcatactgcacatgtgcacgatggaaaactt
gtgcttgttggtggagtgtggtttcactcgctgtgcgtgccaggcatcactgtcattgac
ttaatgactgggctgtgcttggactacacaattaatgcggaacatttggagtggccttta
atgctgcataatcacagcagtgtttttctgccagatgagaaggagttgctgcttattggt
ggtggtgggaactgcttctcctttgggacacacttgaatccaaatcctgtctcactgaac
ctcagcagcattctgaccagccactga
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