Tympanuchus pallidicinctus (lesser prairie-chicken): 128088799
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Entry
128088799 CDS
T08967
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128088799 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpai03021
]
128088799 (SMARCD2)
03036 Chromosome and associated proteins [BR:
tpai03036
]
128088799 (SMARCD2)
Transcription machinery [BR:
tpai03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128088799 (SMARCD2)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128088799 (SMARCD2)
PBAF complex
128088799 (SMARCD2)
GBAF(ncBAF) complex
128088799 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
128088799
NCBI-ProteinID:
XP_052555577
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MAARGAFPLSPLPPSAAAAPPPPGPGPGMMRGPSPSPASAAAPGYRPMGPSGAQYQRPGM
PPGSRMPMAGLQVGPPGAPPYGAASPLRPGLPQSMMDPFRKRLLAPQSQPPMATQRRGVK
RRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRI
YISNTFTPAKEEGEGGERVASWELRVEGKLLEDPSKQKRKFSSFFKSLVIELDKELYGPD
NHLVEWHRLPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTR
ASIMQALWLYIKHNKLQDSHEKEYINCNRYFRQIFNCVRMRFSEIPMKLAGLLQHPDPII
INHTISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDAKIHETIESIN
QLKTQRDFMLSFSNNPQDFIQEWIKSQRRDLKIITDVIGNPEEERRAEFYQQPWAQEAVG
RHIFAKVQQRRQELEQVLGIRLT
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccgcggcgcgttcccgctcagccctctgcctccttccgccgccgccgctcct
ccgcctccgggacccggacccggtatgatgagaggccccagtccgtctccggcttccgcg
gccgccccgggataccgcccgatgggaccttcgggagcgcagtaccagcgccccgggatg
ccgccaggcagccgcatgcccatggcagggctgcaggtgggacctccaggagcacctcca
tatggagcagcatcccctctgcgacccggcctgccacagtccatgatggaccccttcagg
aagcgcctgctggctccccagtcgcagccacccatggccacccagaggagaggggttaaa
aggaggaagatggctgacaaagtcctgccacagaggatccgggaacttgtcccagaatcc
caggcctacatggatctcctcgcctttgagcgcaagctggaccaaaccatcgctcggaag
aggatggagattcaggaggccatcaagaaaccactgacgcaaaagcggaagctgaggatt
tacatctccaacactttcaccccggccaaagaagaaggagagggtggtgagcgtgtggcc
tcttgggagctacgtgtggagggcaaactgctggaggacccaagcaagcagaagaggaag
ttctcctcctttttcaagagcctcgtcatcgagctggacaaagagctgtacgggccagac
aaccatctggtggagtggcaccgtctgcccacgacccaggaaactgatggcttccaagtg
aagcgtcctggagacgtcaatgtgaagtgcaccctgctgctgatgctggatcaccagccc
ccacaatacaaactggaccctcgcctggctcgcctgctgggggtgcacacccagacccgt
gccagcatcatgcaggcgctctggctttacatcaagcacaacaagctgcaggacagtcac
gagaaggaatacatcaactgcaaccgctacttccgccagatcttcaactgtgtccgtatg
cgcttctctgagatccccatgaagctggcagggctcctgcagcacccagatcctatcatc
atcaaccacaccatcagtgtggaccccaatgaccagaagaagactgcctgctatgacatt
gacgtggaggtggatgaccccctgaaagctcagatgagcaacttcctggcttccaccacc
aaccagcaggagatcgcctcactggatgccaagatccatgagaccatcgaatccatcaac
cagctgaagacacagcgcgacttcatgctgagcttcagcaacaaccctcaggatttcatc
caggagtggatcaaatcgcagaggagggacctcaagatcataacagatgtgatcgggaac
cctgaggaggaacggcgagctgagttctaccaacagccctgggcgcaggaggctgtgggc
agacacatctttgccaaggtccagcagcgtcggcaggaactggaacaagtgcttgggatc
cgcctcacttaa
DBGET
integrated database retrieval system
