Tympanuchus pallidicinctus (lesser prairie-chicken): 128088834
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Entry
128088834 CDS
T08967
Symbol
ARHGEF18
Name
(RefSeq) rho guanine nucleotide exchange factor 18 isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128088834 (ARHGEF18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128088834 (ARHGEF18)
Membrane trafficking [BR:
tpai04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
128088834 (ARHGEF18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
C1_2
Motif
Other DBs
NCBI-GeneID:
128088834
NCBI-ProteinID:
XP_052555648
LinkDB
All DBs
Position
Unknown
AA seq
1575 aa
AA seq
DB search
MSDSLLNHSWPSFSKRWKKRWSFKRGSDCKPCLRELADRSPSALEYHSPKRFLPSLIAED
DTLFTSMAEEKEDSSSTELDVPAADLHSSTEDLLSDSALHGTEYYKDLGLLSPPDNKTVP
EMAARPEAAPQAASAICLSEERSGALGKMSVDVAFSNPISCSVRYGEADCHFLNKAASTV
ECPAEEDEASDLQEASESFPTLVRSMSTSRRHSWESPLSPVDCKRRFSLDTTETGSDPEQ
EEAEKGSGSCAQPRVSLQLPGGKQGAWSSSAGSMVIKVQIEPLRPGGTASLGSGEAERVG
DGKRLRPLSIPSACKAASPQAPCGFNTSLSAVEGVEPPALEMLEKDHVSPDQVLIVQQVL
QELKQYHGAKKRACVQEGSDSSQQNLTWFEFLSNENEDSGKSEKAEKGTKVMRRLSSLRS
RVTGSWQKDKGKNKEQSKEKEKDTKEPKESWKEVNRHQLVPGVFSSGTSCSLCAKPLGNK
SGLQCLNCAVNVHKNCKGLLSECSSIRTKQKDLQHRPSGPAQSSSQCISPAASLKEQPQP
RSLLLGPDGTPALPRSLGMTIAQRGNPPSALSTAGAAGKLGLISGDMDEGDSGFIKFKQT
SDDVVSLAPSTADCLFLEDAYSLSLRSEIETDAHEFEAESWSLAVEQSYAKKQKKEVVKR
QDVIYELMQTEMHHVRTLKIMLKVYSKAMKEELQFSNAVINKLFPCVDELLEMHGQFLLQ
LKERRKESLEEGSDRNYTIQNIGDLLVKQFSGENGERMKEKYGVFCSGHNEAVSHYKDLL
QSHKKFQNLIKKIGNCSIVRRLGVQECILLVTQRITKYPVLVERIIQNTEVGTKDYEDLN
HALNLIKYTITHVDAIVNECEKGQRLKEIMHKMELKSSGKCKNGLFFRKDDMGQRRLLLD
GMLYWKAASGRLKDVLAVLLNDVLLLLQEKDQKYVFVSVDSKPPVISLQKLIVREVANEE
KAMFLISASLEGPEMYEIHTGSKEERNSWMAHIRRAVESCPDEEGGSFCEPEAERRLAEA
RAAKLRQFQERLNIKDDLIVQSLTEKQQIYQEMSELYGFEDHSQGSQSRLLLLGDIPESL
QGEALLKSAVVEAENLQNLIFTHLGNGSCQSEESCAVGLPRRAETFGGSDSASISNKNNS
LEKNSGGDQRQWDCRGPAVSSDVQLPELPFDAEEGSQTVCWSNATRQDDSSGVQPTVESQ
LVQRIQTLLQLLFSLQAVISQQDSYIELQRATMVDREKQYRLQSTRGNLLLEQEKQRNFE
KQREELMSVQRLQSQLKLEQQRWERERSQQQRELEMSEAHLQRREEETRQLKEKLIQDRE
ELERQREAYQHDLERLREAQRAVEKERERLDQLRKLKKQNTVSGSFSPELGQNPMQSHAV
SFNGEGGEPSPPVLKASARVSVCGMDYLERAELLRRDSAALEGRPALALKNEVPIHLLSA
TNQIQKAAAVQQQIPTKLAAFTKGSKEKSGKSKASHRTDSSASVDQKQLIPPRLVSREEA
VLRGRRSASPVLTSSQSTAFQTEIPGSADGQPEALSSASPNLFKPSTAHAQTLVTSQPTL
LNMQDDTSKEDVIFF
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcactgctcaaccactcctggccgtcgttctccaagcgctggaagaagaga
tggtcctttaaacgaggatctgactgcaagccgtgcctacgggagctcgctgaccgcagt
ccctctgctttggagtaccacagccccaagcgtttcctcccatccctgattgctgaggat
gacaccttgttcaccagcatggccgaagaaaaggaggactcatcttccacagagctggac
gtcccagcagcagacttacacagcagcacggaggatctcctctcagactccgctctgcac
ggcacagagtattacaaagacctggggcttctgagcccaccagataacaaaacagtgcca
gagatggcagcacggccagaagctgccccccaggctgcatctgccatttgcttatcggag
gagagatcaggggctctaggaaaaatgtctgtggatgttgctttttccaatcccatctcc
tgctcggtgcgttacggtgaggccgactgccactttctgaacaaagctgccagcactgtt
gaatgtcctgcggaggaagatgaagcttcggaccttcaggaggcctcggagtccttcccc
acgttggtgagatccatgtctacctctaggaggcacagctgggagagccccttgtcacct
gtggactgcaagcgcaggttcagcttggataccacagagacaggcagtgatccagagcag
gaggaggcggagaaagggagcgggtcctgcgcacagcctcgtgtgtccctgcagctgccc
ggggggaagcagggagcctggagcagcagtgcgggcagcatggtgatcaaagtgcagata
gagccactgcgacccggcggcacggccagcctgggctcaggggaggcggaacgtgtcggt
gatgggaagagactgaggccactgtccatcccttcagcctgcaaggctgcctccccgcag
gcaccctgtggtttcaacacttctctttcagccgtggaaggtgttgaaccccctgctctg
gagatgctggagaaggaccatgtgtccccagaccaagtgctaatagtacagcaggttctt
caggagctgaaacagtatcacggggcgaaaaagcgagcttgtgtgcaagaaggcagtgat
tcttcccagcagaatctcacctggtttgagttcctgtctaacgaaaatgaggacagtgga
aagagtgagaaagcagagaaaggcacaaaggtgatgcgacgcctgagttccctgcggagc
cgtgtcaccgggtcctggcagaaggataagggtaagaacaaagagcaatcaaaagagaag
gagaaagacacaaaggagccaaaagagagttggaaagaggtcaatcggcaccagcttgtg
ccaggggttttctccagtggcaccagctgctcgctgtgtgccaaacctctcgggaataaa
agtggtctgcagtgcctgaattgtgcagtgaatgtccataagaactgcaagggtttgctg
tctgaatgcagcagcatcagaaccaagcagaaagatttgcagcacagaccttctggacct
gcacaaagttcgtcccagtgcatttccccagcagcttccctgaaggagcagccccagccc
cggagcctgctcctgggccctgatggcaccccggcgctgccgcggagcctcggcatgact
atcgcccagaggggaaacccgccgtctgcgctgagtactgcgggagccgccggcaaattg
ggattaatttcaggagacatggatgaaggggattcaggatttataaagtttaagcagacc
tcagatgatgttgtctcacttgcaccttcaacagcagactgcctttttctggaagatgcg
tattccctgtccctccgaagtgaaatagaaacagacgctcatgagtttgaggcagagtcc
tggagccttgcagtggaacagtcttatgcaaagaagcaaaagaaagaagttgtaaaaagg
caggatgtcatttatgaactaatgcagactgaaatgcaccacgtcagaacactgaaaata
atgctgaaggtgtactccaaagccatgaaagaggaactgcagttctcaaatgcagtcatc
aacaagctgttcccctgtgtggatgagctgctggagatgcatgggcaattcctgctccag
ttaaaggagcggcgaaaggagtccttggaagaaggcagtgaccgaaattacacgatccag
aacattggggacctcttggtaaaacagttctcaggtgaaaatggagagagaatgaaagaa
aaatacggtgtgttctgctctggacacaatgaagctgttagtcactataaggacctgctc
caaagccacaagaagttccaaaacttaataaagaaaattggcaactgttccattgtgagg
agacttggtgtccaggagtgcatccttctggttacgcagcgcatcaccaaatacccggtc
ctggtggaacgcattattcagaatacagaagttggaactaaggattatgaagatctgaac
catgcccttaatttaattaagtatacgatcactcatgtcgatgccatagtaaatgagtgt
gagaaggggcagcgccttaaagagattatgcataaaatggagctgaaatcatctgggaag
tgcaagaatgggcttttcttccgtaaggatgacatgggacagaggaggcttctgctggac
gggatgctgtactggaaggctgcgtcaggacggctcaaagatgttttggcagtcctgcta
aacgatgtactgctgctcttacaagaaaaggaccaaaaatacgtgtttgtatcagtggat
tctaagccaccagttatctcgctgcagaagctgattgtaagagaggtagctaatgaggaa
aaggcgatgttcttaattagtgcttccctagaaggaccagagatgtatgaaattcacaca
ggctcaaaagaagagaggaattcctggatggctcacatccgcagagctgtagaaagctgt
cctgatgaagaaggaggatcattttgtgaacctgaagcagaaaggagactggctgaagca
agagcagcgaaattaagacaattccaagagcgtttgaacataaaagatgacctgattgtg
caaagtctaactgagaaacaacaaatttatcaagaaatgtctgaactgtacggatttgaa
gaccattcccaaggatcccagtctaggctgctacttctgggggatatcccagaaagtctg
caaggagaggcacttctgaagtctgcagtggtagaagctgaaaatctccagaaccttatc
ttcactcacttaggaaatggatcctgtcagtctgaagagagctgtgcagtggggctcccc
aggagagcagagacctttgggggatctgacagtgcctccatttcaaataaaaataacagt
cttgagaagaacagtggtggtgaccagaggcagtgggactgcagaggccctgccgtcagc
tccgatgtgcagctcccagagctcccattcgatgcagaagaaggatctcaaactgtgtgt
tggagcaatgcaacgaggcaggatgacagcagtggtgttcagcccaccgtagagtctcag
cttgtgcaaaggatacaaacgctgctgcagttgctcttcagtcttcaggcagtgatatct
caacaggacagctacattgagctgcagcgagccacaatggtggacagggagaagcagtac
cggctgcagtccacgcgtggcaacctgctgctggagcaagagaaacagcggaactttgag
aaacagagggaagaactgatgagtgtccaaagacttcagagccagctgaagctggagcag
cagcgctgggagcgggagaggagccagcagcagagggagctggaaatgtcggaagcccac
ctgcagaggcgtgaggaggagacgcggcaactgaaagagaagttgattcaggacagggaa
gagctggagaggcaacgtgaggcctatcagcatgacctggagaggctgcgggaggctcag
agagcagttgagaaggagagagagcgtctagaccagctaaggaagctgaagaagcagaac
accgtgtcgggcagcttctccccagaactgggacaaaacccgatgcagagtcacgctgtc
agcttcaacggagaaggaggagaaccatctccgccggtcctgaaagcctctgcgcgcgtc
agcgtctgtggcatggattacttggagcgcgcagagctgctgcgcagggacagcgccgcc
ctggagggccgcccggccctggctctgaagaacgaggtgcccatccacctgctgagcgcc
accaaccagattcagaaagccgccgcagtgcagcagcagatccccaccaaactcgccgcc
ttcacgaaaggaagcaaagagaaaagtgggaagagcaaagcgtctcataggacggacagc
tcggcatctgtggaccagaagcagctgattccccccaggctggtcagcagagaggaggct
gtcctcaggggcaggcgatcagcaagcccagtcctcacgagcagccagagcactgcgttc
cagacagaaatacccggctctgcagatggtcagccagaagcactttcttctgcctcccca
aacctgttcaaacccagtactgctcacgctcagaccctggtgacctcacagccaactctt
ttaaacatgcaagatgataccagcaaagaagatgtaatttttttctaa
DBGET
integrated database retrieval system
