Tympanuchus pallidicinctus (lesser prairie-chicken): 128088876
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Entry
128088876 CDS
T08967
Symbol
OCLN
Name
(RefSeq) occludin isoform X1
KO
K06088
occludin
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03272
Virion - Hepatitis viruses
tpai04382
Cornified envelope formation
tpai04514
Cell adhesion molecules
tpai04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
128088876 (OCLN)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128088876 (OCLN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128088876 (OCLN)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128088876 (OCLN)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpai01009
]
128088876 (OCLN)
Protein phosphatases and associated proteins [BR:
tpai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128088876 (OCLN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
TgpA_N
Spectrin_Anc-1
DASH_Dad1
T3SSipB
DUF6063
Baculo_11_kDa
Motif
Other DBs
NCBI-GeneID:
128088876
NCBI-ProteinID:
XP_052555721
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MFSKKSYDGPPAGYGPPMGYGPPMGYGPPTGDYGYGSPPPGSYYVEDTPQHFYKWTSPPG
VVRGLQAGILVLCIAIFACVASTLAWDYGLGGTYGTGLGGYYGSNYYYGSGLSYSYGYGS
YYGTVNQRTANGFMMAMAVLCFLAQLGLLVAALSKSRAMRSRRFYLLVLVLSAVLAFVML
IASIVYIIGVNPQAQMSSSYYYSPLLAMCSQAYSTSYLNQYIYHYCTVDPQEAVAAVCGF
LIVVLLCLICFFAQKTRSKIWRYGKANIYWDRAPVVQEGPNVEEWVKNVADGASVQDETA
TLAYSEKPTSPVTAPPYSYVPPPNTSYYPSGTYSSRGDQPDRALSASPVQVEEEEEKGKD
QPSRPSARRGRRRRRNPELDESQYETDYTTAVESGDERDQEQWASLYPPITSDSTRQRYK
QEFDTDLKRYKQLCAEMDSVNDRLNQLSRQLDSIAEDSPQYQDVAEEYNQLKDLKRSPDY
QSKKQESKVLRNKLFHIKRMVGAYDKVRG
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagaagtcctacgacggcccccctgcgggttacggccccccgatggggtac
ggccccccgatggggtacggcccccccacgggtgattacggctacgggtcgccgccgccg
ggctcctactacgtggaggacaccccgcagcacttctacaagtggacgtcgcctcccggc
gtggtgcgggggctgcaggcggggatcctggtgctgtgcatcgccatcttcgcctgcgtc
gcatccacgctcgcctgggactacggcctgggggggacctacggcaccgggctggggggg
tactacggctccaactactactatggcagcgggctgagctacagctacggctacgggagc
tactatggaacggtgaaccagcgcacggccaacggcttcatgatggccatggccgtgctg
tgcttcctggcccagctggggctgctggtggcggcgctcagcaaatccagggccatgcgc
tcgcggcgcttctacctgctggtcctggtgctcagcgctgtgctggccttcgtcatgctc
atcgcctccatcgtctacatcataggtgtcaacccgcaggcgcagatgtccagcagttac
tactacagccccttgctagccatgtgcagccaggcctatagcaccagctacctcaaccag
tacatctaccactactgcaccgtggacccccaggaggccgtggctgctgtctgtgggttc
ctcatcgtcgtgctgctctgcctcatctgcttcttcgcccagaagacgcgcagcaagatc
tggcgctacggcaaagccaacatctactgggaccgtgcgcccgtggtgcaggaggggccc
aacgtggaggaatgggtgaagaacgtggcggatggggccagcgtgcaggacgagacggcc
actcttgcctactcagagaagcccaccagccctgtcactgcccccccctacagctacgtg
cccccccccaacaccagctactacccctcaggcacctacagcagccggggcgaccagccg
gatcgggccctcagtgccagccctgtgcaggtggaggaggaggaggagaaggggaaggat
cagcccagcagaccctccgcccgccgtggccgccgccgccgccgcaaccccgagttggat
gagtcccagtatgagaccgactacaccacagctgtggagtctggtgatgagcgggaccag
gagcagtgggccagcctgtacccccccatcacgtcggacagcactcggcagcgctacaag
caggagtttgacaccgacctgaagcgctacaagcagctctgtgccgagatggacagcgtc
aacgaccgcctcaatcagctcagccggcagctcgacagcatcgccgaggacagccctcaa
taccaggatgtggcagaggaatacaaccagctgaaagacctgaagcggagcccagactac
cagagcaagaagcaggagagcaaggtgctgcgcaacaagctcttccacatcaagcgcatg
gtgggtgcttacgacaaggtgcgggggtaa
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