KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128088990
Entry
128088990         CDS       T08967                                 
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03018  RNA degradation
tpai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128088990 (LSM4)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    128088990 (LSM4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpai03019]
    128088990 (LSM4)
   03041 Spliceosome [BR:tpai03041]
    128088990 (LSM4)
Messenger RNA biogenesis [BR:tpai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     128088990 (LSM4)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     128088990 (LSM4)
Spliceosome [BR:tpai03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    128088990 (LSM4)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 128088990
NCBI-ProteinID: XP_052555934
LinkDB
Position
Unknown
AA seq 138 aa
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQQQKQQKGRGVGGAGRGVFGGRGRGIP
GSGRGQQEKKPGRQSAKQ
NT seq 417 nt   +upstreamnt  +downstreamnt
atgctgcccctgtcgttgctgaagacggcgcagaaccaccccatgctggtggagctgaag
aacggagagacgtacaacgggcacctggtgagctgtgacaactggatgaacatcaacctg
cgggaggtcatctgcacctcacgggatggagacaagttctggaggatgccggagtgttac
atccgtggcagcacaatcaaatacctgcggatccccgatgaaatcatcgacatggtgaaa
gaggaggtggtctccaagggcagaggccgtggggggatgcaacagcagaagcaacagaaa
ggccgtggcgttggaggtgctggacgaggtgtgtttgggggccgtggccgaggaataccg
ggcagcggaagaggccagcaggaaaaaaagccaggcaggcaatcggcgaagcagtga

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