Tympanuchus pallidicinctus (lesser prairie-chicken): 128089042
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Entry
128089042 CDS
T08967
Symbol
CACNB1
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-1 isoform X1
KO
K04862
voltage-dependent calcium channel beta-1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04010
MAPK signaling pathway
tpai04260
Cardiac muscle contraction
tpai04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128089042 (CACNB1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
128089042 (CACNB1)
04261 Adrenergic signaling in cardiomyocytes
128089042 (CACNB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpai04040
]
128089042 (CACNB1)
Ion channels [BR:
tpai04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128089042 (CACNB1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
DUF6374
Motif
Other DBs
NCBI-GeneID:
128089042
NCBI-ProteinID:
XP_052556040
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MVREGGMARPPYSSAQDIQMDVFDNAALQGKYSKRKSRFKRSDGSTSSDTTSNSFVRQGS
AESYTSRPSDSDVSLEEDREALRKEAERQALAQLEKAKTKPVAFAVRTNVGYNPSANDDV
PVQGMAICFEPKDFLHIKEKYNNDWWIGRLVKEGCEVGFIPSPVKLENMRLLQEQKMRQN
RLSSSKSGDNSSSSLGDVVTGTRRPTPPASGALDTHSFAFEPDELEEEEAAETHCSPKSS
VSSVTTPPAHSKRIPFFRKAEHVPPYDVVPSMRPIILVGPSLKGYEVTDMMQKALFDFLK
HRFDGRISITRVTADISLAKRSVLNNPSKHTIIERSSTRSSLGKAAEVQSETERIFELAR
TLQLVALDADTINHPAQLAKTSLAPIIVYIKIASPKVLQRLVKSRGKSQAKHLNVQMVAS
DKLAQCPPEMFDIVLDENQLEEACEHLAEYLEAYWKATHPPSSNPPNPLLNRTMATAALA
ASPAPVSNLQVQVLTSLRRNLGFWGRGGADATPSPQEEHAL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgggaggggggcatggcgcgcccgccctacagctcagctcaggacatccagatg
gacgtcttcgacaacgcagcgctccagggcaaatacagcaagcgcaagagccgcttcaag
cgctctgatggcagcacctcatctgacaccacctccaacagcttcgtccggcagggctca
gctgagtcctacaccagccgcccctcggactcggatgtgtccctggaggaggaccgcgag
gcgctgcgcaaagaggctgagcgccaggcgctggcacagctggagaaagccaagacgaag
ccggtggcgtttgctgtccggacaaatgttggctacaacccatcggccaatgatgatgtg
cctgtgcagggcatggccatctgcttcgagcccaaagacttcttacacatcaaggagaag
tacaacaatgactggtggattgggcggctggtgaaggaaggctgcgaggtcggcttcatc
cccagccctgtcaaactggagaacatgcggctgctgcaggagcagaagatgaggcagaac
cgactgagctccagcaaatcaggtgacaactccagctccagccttggtgacgtggtgacg
gggacacgcaggcccacccctccggccagtggtgccctggacacacatagctttgccttt
gagcccgatgagttagaggaggaggaggctgcggagacccactgctcccctaagagtagt
gtgagcagtgtcaccaccccccccgcccactccaagcgcatccccttctttaggaaggct
gagcacgtgccgccctacgatgtggttccctccatgcggcccatcattctggtggggcca
tcattgaagggctacgaggtgacagatatgatgcagaaagcactgtttgatttcttgaag
catcgctttgatggcaggatctccatcacgcgggtgacggccgacatctccctcgccaag
cgctctgtgctgaacaaccccagcaaacacaccatcatcgagcgctccagcacacgctcc
agcctgggtaaggcggctgaggtgcagagtgagacggagcgcatctttgagctggcccgg
accctgcagctggtggccttggatgctgacaccatcaaccacccggcccagctggccaag
acctccctggcacccatcatcgtctacatcaaaatcgcctccccaaaggtgctgcagcgg
ttggtgaagtctcggggcaagtcccaggccaagcacctcaacgtgcagatggtggcctcc
gacaagctggcgcagtgcccgcctgagatgtttgacatcgtgctggacgagaaccagctg
gaggaggcctgcgagcacctggccgagtacctggaggcctactggaaggcgacgcacccc
cccagcagcaacccccccaacccgctgctcaaccgcaccatggccacggccgctctggcc
gccagccccgcgcccgtctccaacctgcaggtacaggtgctcacctccctgcgcaggaac
ctgggcttctggggccgcgggggcgccgacgccacccccagcccccaggaggagcacgcg
ctgtga
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