Tympanuchus pallidicinctus (lesser prairie-chicken): 128089107
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Entry
128089107 CDS
T08967
Symbol
CNTNAP1
Name
(RefSeq) contactin-associated protein 1
KO
K07379
contactin associated protein 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128089107 (CNTNAP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tpai04990
]
128089107 (CNTNAP1)
Domain-containing proteins not elsewhere classified [BR:
tpai04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
128089107 (CNTNAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
F5_F8_type_C_2
EGF
Laminin_G_3
Fibrinogen_C
Motif
Other DBs
NCBI-GeneID:
128089107
NCBI-ProteinID:
XP_052556153
LinkDB
All DBs
Position
Unknown
AA seq
1304 aa
AA seq
DB search
MGVRRLFGFLLAACAALLGPGPGCLARPCYDELVGSLYSSSIGASSRYNIFYSASFARLH
STSGWSPDPRDKQPWLQIDLMQKHRINAVATQGTFNTYDWLTRYIVLYGDHPTSWKPFFQ
QGSNWTFFGNVNESGVVRHDLHYPILARYVRIIPVAWNPRGKIGLRLGLYGCPYRSHVLY
FDGDDAISYRFRAKKISTMEDDISFNFKTVEQDGVLMHGEGSQGDYITVELKQAQLLLHI
SLGSSPLHATEGHTTVAVGSLLDDQHWHSLHIERYGHHVNLTLDGEVKRFRCHGTFDHLD
LETEIFFGGVIDQDKQHLTYRQNFRGCVENIIFNGVNIADLARHRRSNIRFEGSVGHYCQ
DQVNTPITFAGINNYVQVPGIPRRNRLAVSFRFRSWDTAGLLLYTSFADRLGSLEMVLSE
GQVNVSIAQPGKKKLEFAAGHRLNDGFWHSVQLVAREGSAVVTIDDDDGAEFRVAHPFQL
RTGSQYFFGGCPKPASLTGCRSNQTAFHGCLQMLSVDMQPVDLEMLVQHRLGKYADVFFN
VCGITDRCTPNLCEHDSRCVQSWDDFMCICDLTGYKGETCHKSLYKESCDAYRVSGKTSG
NYTIDPDGSGPLKPFTVYCDIREDQAWTIIRHNRHYATRVTGSSVDQPYLGEVEYWNASW
AEVSALANASEYCEQRIEFHCYSSRLLNTPSGLPYSFWMGRNNERHYYWGGSRPGIQRCA
CGLDKNCADPEYFCNCDANHALWRTDKGLLTFVDHLPVTQVVVGDTNRSGSEAQFLLGPL
RCYGDRNTWNTVSFNKGAALLFPTFRANHSLDISFYFKTTAPSGVFLENPGTQNYIRVEL
NTTRDVVFAYDIGNGHENLTVRSAVPWNDDEWHQVKAELNVKLARLRVDRLPWVVRPAPP
QSFVHLEFDRPLYVGSAEHKMRPFLGCLRALRMNGVTLNLEGKANETEGVQVNCTGHCQD
PPVPCQNSGLCVERYSHYSCNCSISAFDGPFCNYDIGGYFEEGAWVRYNILPMSLYAARE
FASIVSSPWQPLPGYNLTNEEVSFSFSTTSAPAVLLYVSSFVKDYMAVLIKDDGSLQLRY
QLGTSPYVFALTTKPVTDGRPHHVNITRWHRTLYTQVDYLPVMEQQFSLFVDRKLDSPKN
LYLGRVMETGVIDPEIQRYNTPGFSGCLSGVKFNSIVPLKAIFRPTSIVRPYSVQGEVVE
SSCASMLPLTTILIPPEMDPWYMGTEFPHVHDDGWVGIIIGFVTFLLLLLGGLLVLLYFY
YHRYKGSYHTNEPKAIQDYSSAVKPLSVRKDQNLPQILEEPKGD
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcgccgcctcttcgggttcctgctcgccgcttgcgccgctctcctcgggccc
ggccccggctgcctcgcacggccgtgttacgatgagttggttggatccctctactcctcg
tccatcggcgcctcttcccgatacaacatcttctactcggcaagcttcgcccggctgcac
agcactagcgggtggtcccctgacccccgtgacaagcagccctggctgcaaatcgacctg
atgcagaagcacaggatcaacgcagtggccactcaggggaccttcaacacatatgactgg
ctgacacgctacatcgtgctctatggggaccatcccaccagctggaaacccttcttccag
cagggcagcaactggactttctttgggaatgtgaatgagagtggtgtggtgaggcacgac
ctgcactaccccatcctcgcccgctacgtccgcatcatcccagtggcctggaacccacga
gggaagatcgggctgcgcctgggcctctatggctgcccctaccgatcccatgtgctctac
ttcgatggggatgatgcaatctcctaccgcttccgggccaagaagatcagcaccatggaa
gatgatatctccttcaacttcaagacagtggaacaggacggtgtgctgatgcatggggag
ggttcgcagggtgactacatcacagtggagctcaaacaagcccagctcctcctgcacatc
agcttaggcagcagtcccctgcacgccaccgagggccacacgacggtggcggtgggcagc
ctcctggatgaccagcactggcactcgctgcacatcgagcgctacggccaccacgtcaac
ctgacgctggacggagaagtgaagcgcttccgctgccacggcacctttgaccacctcgac
cttgaaactgagatcttcttcggaggggtgattgaccaggacaagcagcacctcacctat
cggcaaaacttccgtggctgtgtggagaacataatcttcaatggggtcaacatcgctgac
ctggcccggcaccggagatccaacatccgctttgagggcagcgtgggccactactgccag
gaccaggtgaacacccccatcacctttgccggcatcaacaactacgtgcaggtgccaggc
atcccccgcaggaaccgtctggctgtcagctttcgcttccgctcctgggatacagctggg
ctgctgctctacactagttttgctgaccgcctgggctcactggagatggtgctgagtgag
ggccaggtcaatgtctccattgcccagcctggcaagaagaagcttgaatttgctgcagga
catcgcctgaatgatggcttctggcactcggtgcagctggtagcacgggagggctcagcc
gtggtgaccattgatgatgacgatggcgctgagtttcgtgtggctcatcccttccagctc
cgcactggcagccagtacttctttggaggctgccccaagcccgcgtcgctcactggctgc
cgctccaaccagacggcgttccacggctgcctgcagatgctgagtgtggacatgcagccc
gtggacctggagatgctggtgcagcaccgcctggggaagtatgccgacgtcttctttaat
gtctgtggcataacggacaggtgcacccccaacctgtgtgagcatgacagccgctgtgtg
cagtcctgggatgacttcatgtgcatctgtgacctgacgggctacaagggagagacctgc
cacaaatccctttacaaagaatcctgtgatgcataccgggtcagcgggaagacctcgggg
aactacactattgacccagatggcagcggaccactgaagcccttcacagtgtactgtgac
atccgagaggatcaagcatggaccatcatccggcacaatcggcactatgccacacgagtg
acgggctccagcgtggaccagccctacctgggcgaagtggagtactggaatgcctcctgg
gctgaggtctcagcactggccaatgcctctgagtactgcgaacagcggattgagttccac
tgctacagctctcgcctgctcaacaccccctccgggctgccctacagcttctggatgggc
cgaaacaacgagcggcactactactggggcggctcgcggccgggcatccagcgctgcgcc
tgcgggctggacaagaactgtgctgatcccgagtacttctgcaactgtgatgccaaccac
gcactgtggaggacagacaaaggtctgctgaccttcgtggaccacctgcccgtcacacag
gtggtggtgggagacaccaaccgctctggatccgaagcacagttcctgctgggccccctg
cggtgctacggagaccgaaacacctggaacaccgtctccttcaacaaaggtgcagccctg
ctcttccccaccttccgcgccaaccacagccttgacatctccttctatttcaagactacc
gccccatccggcgtcttcctggaaaaccccggcacacaaaactacatccgtgtggagctt
aacaccaccagggatgtggtgtttgcctacgacattggaaatgggcacgagaacctgacg
gttcgctcagcggtgccctggaatgacgacgagtggcaccaggtgaaggcagagctcaac
gtgaagctggcccggctgcgggtggacagactgccctgggtggtgcggccggccccacca
cagagcttcgtccacctggagttcgacagacccctctatgtcggctcagcggagcacaag
atgcgtccattcctggggtgcctgcgggcgctgcggatgaacggcgtgacgctcaacctg
gagggcaaggccaacgagacggagggtgtgcaggtgaactgcaccggccactgccaggac
ccaccggtgccctgccagaacagcgggctctgcgtcgagcgctacagccactacagctgc
aactgcagcatctctgcctttgatgggcccttctgcaactatgacatcggtgggtacttc
gaggagggtgcctgggtgcggtacaacatcctgcccatgtcgctgtatgctgcccgcgag
tttgccagcatagtcagcagcccctggcagcccctgcctggctacaacctcactaatgag
gaggtcagcttcagcttcagcaccacctcggcccctgctgtgctgctctacgtcagctcc
tttgtgaaggactacatggccgttctcatcaaggatgatgggagcctgcagctgcgctac
cagctgggcaccagcccctacgtctttgccctcaccaccaagccagtgacagatgggaga
cctcaccatgtcaatatcacccgctggcaccgcacgctgtacacgcaggtggattatctg
ccagtcatggagcagcagttctccctgtttgtggatcgcaagttggactcacctaagaac
ctgtacctggggcgtgtgatggagaccggcgtgattgaccccgaaatccagcgctacaac
acacccggattctcaggctgcctctcaggggtgaagtttaacagcattgtccccctcaaa
gccatcttccgccccaccagcattgtgcggccctacagtgtacagggggaggtggtggag
tccagctgtgcctccatgctgcccctcaccaccatcctcatcccgcccgagatggacccg
tggtacatgggcacagagttcccccacgtgcatgatgatggctgggttgggatcatcatc
ggattcgtgacattcctgctcctgctgctcgggggcttgctggtgctgctctatttctac
taccaccgctacaagggctcctaccacaccaatgagcccaaggccatccaggactacagc
agcgccgtcaaaccgctgtcagtgcgcaaagatcagaacctgccccagatcctggaggag
ccaaaaggggactag
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