KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128089252
Entry
128089252         CDS       T08967                                 
Symbol
KDM4C
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tpai03036]
    128089252 (KDM4C)
Enzymes [BR:tpai01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     128089252 (KDM4C)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     128089252 (KDM4C)
Chromosome and associated proteins [BR:tpai03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    128089252 (KDM4C)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Tudor_5 SLX1_C DUF7141 LBR_tudor
Other DBs
NCBI-GeneID: 128089252
NCBI-ProteinID: XP_052556430
LinkDB
Position
Unknown
AA seq 1070 aa
MATVTSDSPPNPSCKIMTFRPSMDEFREFNKYLAYMESQGAHRAGVAKVIPPKEWKPRKH
YDDIEDLVIPAPIQQMVTGQSGLFTQYNIQKKPMTVKEFKQLANSDKYCTPRYIDYEDLE
RKYWKNLTFVAPIYGADINGSIYDKGIEEWNIAHLNTILDVVGEDCGISIEGVNTPYLYF
GMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSHGCNAFL
RHKMTLISPSILKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATIRWID
YGKAAKLCTCRKDMVTISMDVFVRKFQPDRYQLWKQGKDLYTIDHTKPTPESTPEVKMWL
QRRKKIRKLSDSSFQHNRSRSKKLKTPGDKRQSAMATGAEIKETEATTDGFKVNEKPDEK
VSPLNTEVPSGEEESSSRMQLDQHLLDNVKVAGSILSDSFSCPVPLRMEPKAGEDKEDSS
DSLVAFEDSGACVPTSNSCKKEESLKTQYKSKSSIPYLKCQEHNSEAESPAKKVNVSTED
DVSDLESGSSLSRGELPVAKRNEDDDMETSNSSEAEGKKVSKSWRHPLNKPPARSPMTLV
KQQATSDEELPETAFTEEEVQETETWARPLVHLWQTRTPNFNAEKEYNACCAKKEPYCAI
CTLLMPYYKPENLDEENSTYKEANLEEKLVIENEKSRPLIPEMCFIYSEENTENSPSNAL
IDEDGTSLLISCAKCCVRVHASCYGVPSHEIHNEWLCSRCRTEAWTAECCLCNLRGGALK
QTTDKKWAHVMCAIAVPEVRFGNVTERTPIDTSRIPLQRLKLKCIFCRQRVKKTSGACIQ
CSYGRCPASFHVTCAHAAGVLMEPDDWPYVVYITCFRHKINQNVRTKACEKTITVGQTVI
AKHRNTRYYSCRVIGVTSQLFYEVMFDDGSFSRDTFPEDIVSRDCLKLGPPAEGEVVQVK
WPDGKLYGAKYLGPNTAHMYQVEFEDGSQILMKREEIYTLDEELPKRVKARFSTASDMRF
EDTFYGADIILGEKKRQRVLSSRFKNEYVDDPGYRTFLKSSFQKKCQKGQ
NT seq 3213 nt   +upstreamnt  +downstreamnt
atggcgacggtcacatctgatagtcctccaaatccaagttgcaaaatcatgacttttagg
ccttcaatggatgaattcagagagttcaacaaatacttagcatacatggaatcgcaaggt
gctcatagggctggagttgcaaaggttatcccaccaaaggaatggaagccaagaaaacat
tatgatgatattgaagatctggtgattcctgctccaattcagcagatggtcactggccag
tcagggctcttcacacaatataacattcagaaaaagccaatgacagtgaaggaattcaag
cagctggccaacagtgacaaatactgcaccccaagatacatagattatgaagatctggag
cgtaaatactggaagaacttgacttttgtggcaccaatttatggagcagatatcaatggg
agcatttatgataaaggtattgaggaatggaatattgctcatcttaatacaatattggat
gttgtaggagaagactgtggaatttctattgagggtgtgaataccccatacctgtatttt
ggcatgtggaaaacaacatttgcatggcacactgaagatatggatctctacagcattaat
tatctccattttggggagccgaagtcatggtatgcaattcctccagagcatgggaaacgg
cttgaacgactggctcaaggattcttcccaagcagctctcatggatgtaatgcatttctt
cgccacaagatgactctgatttctccctcaatactgaaaaagtacggaattccttttgac
aaggttacacaagaggcaggggaatttatgatcactttcccatatggataccatgcagga
tttaaccatggcttcaactgtgcagagtcaacaaactttgcaaccatcagatggattgat
tatggaaaagcagcgaagttgtgcacctgcaggaaagacatggtcacaatttccatggac
gtttttgtgagaaagtttcagccagacagataccagctgtggaaacaaggcaaagattta
tataccattgatcataccaagccgactcctgaatcaacacctgaagtaaagatgtggcta
cagagaagaaagaaaataaggaaactttccgatagcagcttccagcacaacagatctcga
tctaaaaagcttaaaactccaggggacaagagacaatctgctatggcaactggtgcagaa
atcaaagagactgaagcaactactgatggcttcaaggtcaatgaaaaaccagatgaaaaa
gtgagtccgctgaatacagaagtgccttctggagaagaagaaagcagtagcagaatgcag
ctggatcaacatttattggataatgtcaaggttgcaggaagcatcctttcagattcattt
tcctgtcctgttcctttacgaatggaaccaaaagctggtgaggacaaggaggattccagt
gactctctcgttgcatttgaagattcaggggcctgtgtgcccacttcaaatagctgtaag
aaagaagagagtttgaaaactcagtataagtctaaatcatccataccatacctgaagtgc
caggaacataattctgaggcagaaagcccagctaaaaaggtgaatgtctctacagaggat
gatgtcagtgacctagaaagtggaagtagcttgagtcgtggtgaactgccagttgcaaaa
aggaatgaagatgatgacatggaaacatccaattcatcagaagctgaaggaaagaaagta
tctaagagctggcgtcatccactaaataaacccccagctagatctccaatgactttggtt
aaacagcaagcaactagtgatgaagaactgcctgaaactgcatttactgaagaggaagtt
caagagacagagacatgggctaggcctcttgtccacctttggcagacaagaacacctaat
ttcaatgctgaaaaagaatacaatgcatgttgtgcaaaaaaggagccctactgtgcaatt
tgcactcttctcatgccatactacaagccagaaaatcttgatgaagaaaattctacttac
aaggaagcaaacttagaagaaaaactagtgattgaaaatgagaagtctagacctcttatt
ccagagatgtgttttatttatagcgaagaaaacactgaaaactctccatcaaatgcctta
attgatgaggatggaacaagtcttcttatttcctgtgcgaagtgttgtgtacgagtacat
gcaagttgctatggtgttccttctcatgaaatccataatgaatggttgtgttctcgatgc
agaacagaagcatggacagctgaatgttgtctctgcaatttgagaggtggtgcattaaaa
caaactactgacaagaagtgggctcatgtaatgtgtgcaattgccgttccagaagtcaga
tttggtaatgtcacagaacgtacaccgatagacactagcagaatacctttacaaagatta
aaattgaaatgtattttctgcagacagagagttaagaaaacctctggtgcctgcattcaa
tgttcatacggacgctgtccagcctccttccatgtgacctgtgcccatgctgcaggagtg
ctgatggagcctgatgactggccatatgttgtctacatcacttgtttcaggcataagatc
aaccaaaatgtgagaactaaagcatgtgagaagaccattacagttgggcagacagtcatc
gcaaaacatcggaatacaagatactacagctgcagagtcattggagtgacatcacagctt
ttctatgaagtcatgtttgatgatggctcttttagtcgggatacttttcctgaagacatc
gtgagcagagattgcctaaagctgggcccacctgcagagggagaggttgttcaagtgaag
tggcctgatggaaagctgtatggtgcaaagtatctgggaccaaacacagctcacatgtat
caggttgagtttgaggatggttctcaaatattaatgaagagagaagagatctatactcta
gatgaagagcttcctaaaagagtgaaagcccgtttttctacagcgtctgacatgagattt
gaagacacgttttatggagcggatattatcctgggagaaaagaagagacagagagtactg
agttcccgttttaagaatgagtatgtggatgatccaggataccgcaccttcttaaaaagc
tcgttccagaagaagtgccagaaggggcaataa

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