Tympanuchus pallidicinctus (lesser prairie-chicken): 128089311
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Entry
128089311 CDS
T08967
Symbol
SNCAIP
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
SNCAIP_SNCA_bd
Ank_4
Ank
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
128089311
NCBI-ProteinID:
XP_052556551
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MEAPEYLDLDEIDFSDDISEVTKKLSTCQYSITSLKTIPELCRRCDSQNEDRSVSSSNWN
CGGSALIGNAQKPTGIADACNKFRPVKRVSPLKHQPESSENNESDDQKNQKGEYQKGSDS
QPAPPNDDQSPGEGENLKSKNIEPTVLLGELEHYDLDMDEILDVPYIKSNQQLVPFTKVA
PEKKISGVCSTVNGVSGKTCSTESTEPAGVTQFCVLSPVKGSQLRKTQPIVVDQHKHLTE
ELELSQPLAKCSSVHESEAQGKGFLCRTFVGPQTHKTGKTMPNCHLRTFHLQTAVAESKQ
LEELNMSWSRAGGPEERSEEVKKFKSILNIVKEGQISLLPHLAADNLDKIHDECDNNLLH
VAASKGHAECLQHLTSLMGEDCLNERNMEQLTPAGLAIKNGQLECVRWMVSETEAIAELS
CSKDHPSLIHYAGCYGQEKILLWLLQFMQEQGISLDEVDQDGNTAVHIAAQHGYLGCIQT
LVEYGANVTMQNHMGEKPSQSAERHGHTMCSRYLVVVETCMSLASQVVKLTKQLKEQTVE
RVTLQNQLQQLLEAQRSEGKSLPTSTSSPSSPASGKPQWKPSEADELSPPKSKLNAQDGI
QILGSLGTSSRTRAKMKDEDSDKILRQLLGKEISENVCMQEKLTLEFQDAHASSKNVKKI
LPEKRELKLARLRQLMQRSLSESDTDSANSEDHKNTPVKRTDKLRPQPIVESVESTESLH
LMIKKHTSAAGRRFPFSTRASKSVDGHSPSPTSESSDPDNEAQYQSGTVPQGQFCGDSSP
SSTDGAAAQKVATSPKSALKSPSSKRRTSQNLKLRVTFEEPVVQVELAEAELNEEKDKER
GKALSRAPPTTGEPSGDQLKRPFGTFRSIMETLSGNQNNNNNCQTANLIKTSSTLPFSSL
GRKTADSKGNPAALTKGRNKPGPCFSHTNLSSSTLNEEHLCNYAWHDNISRKSQKSYSQK
SSEETEPQELFL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccctgaataccttgatttggatgagatagactttagtgatgatatatcggag
gtgactaagaagctgtcaacttgccagtactctataacttctctcaagactatcccagaa
ttatgtagaaggtgtgattcacaaaatgaagacagatcagtttccagcagcaactggaac
tgtggtggctctgctcttatcggaaatgcacagaaaccaacaggaattgcagatgcgtgc
aataaattcagaccagtgaagagggtttccccattaaagcatcagccggagagctctgag
aacaatgaaagtgatgaccaaaagaaccagaagggtgaataccagaaaggcagtgactct
cagcctgcacctccaaatgatgaccagagcccaggagaaggagaaaaccttaaaagtaaa
aacattgagcctactgttctgcttggggagctggagcactatgacctggatatggatgaa
attttggatgtgccttacattaaatcaaatcagcaacttgttcctttcacaaaggtagcc
cctgagaaaaaaatttctggtgtatgctcaacagtgaatggtgttagtggcaagacctgc
tctacagagagcacagagcctgctggggtgacacagttctgtgttctctctcctgtgaaa
ggctctcagctgagaaaaacgcagcccattgttgttgatcagcacaagcatttaacagaa
gaattagagctttcccagcctttagcgaagtgtagctcagtccatgaatctgaagcccag
ggcaaagggttcctctgtaggacatttgttggtcctcagactcacaaaactgggaagact
atgccaaactgccacctaaggacttttcacctgcagacagcagtggcagagagcaagcag
cttgaggaactgaatatgagctggagcagggcaggggggccagaagagaggagtgaagag
gtgaaaaaatttaagagcatcttaaacattgtaaaggaggggcaaatatcattactgcca
catttagcagcagataatctggataagattcatgatgaatgtgacaacaatctgttgcat
gtagcagcatcaaaaggacatgcagaatgcctgcagcatctcacttctttgatgggtgaa
gactgcttgaatgaaagaaacatggagcagctaactccagctggtttagcaataaagaat
ggtcagctggagtgcgttcggtggatggtgagcgaaacagaagctattgcagaactaagt
tgctcaaaagatcacccaagccttattcattatgctggctgctatggtcaggagaaaatc
cttctatggcttcttcagtttatgcaagaacaagggatttcactggatgaagttgatcag
gatggaaatactgctgttcacatagctgctcaacatggctatctaggatgtatacagaca
ttagttgaatatggagcaaatgtcaccatgcaaaaccacatgggagagaaaccctcacaa
agtgctgagcgacatgggcacacgatgtgttcccgctacctagtggtggtggagacctgt
atgtcattggcctctcaggttgtcaagctaacaaagcaactaaaggagcagacagtagaa
cgtgtgacgttgcagaaccaactccaacaacttttagaggcccagcgatcagagggcaag
tctctgcccacatccacaagctcaccatcatcccctgcctctggcaaaccccagtggaaa
ccatctgaagcagatgaattgtctccaccgaaaagtaaattgaacgcccaagatgggatt
cagattcttggcagcttgggaacttctagtcgcactcgagccaagatgaaagatgaggac
tcagataaaatcttgcgccagttgttgggaaaggaaatctctgaaaatgtctgtatgcag
gaaaaactgaccttggaatttcaggatgctcatgcatcctccaagaacgtgaagaagatt
ttgccagagaaaagggagctgaagttagccagactgaggcagcttatgcagaggtctctc
agtgagtctgacacagactcagctaattctgaggatcataagaacactcctgtgaaaaga
actgacaaactaaggcctcaacccatagtggaaagtgttgagagtacagagagtttgcac
ctgatgattaagaagcatacttcagcagcagggcgccgcttcccttttagtaccagagct
tctaagtcagtggatggccacagcccttcccctacttcagagagcagcgatccagataac
gaggctcagtatcaatctggtactgtacctcagggccagttttgtggagacagctctcct
tccagcacagacggtgctgctgctcaaaaggttgccacaagccctaagagtgcacttaag
tctccatcttcaaaacgcagaacctcgcaaaatttgaaactcagagtgactttcgaggag
cctgtggtgcaggtggagctagctgaggcagagctaaatgaggaaaaggataaagaacgg
ggcaaagcactttcacgggctccacccaccactggagaaccatcaggggaccagctaaaa
aggccttttggaacctttagatccataatggagacactgagtggtaaccaaaataataac
aacaactgtcaaacggcaaatctgatcaaaacctcatcgacgctgcctttttcgtcgtta
ggaagaaagacagcagacagcaagggaaacccagcagctctgacaaaaggaagaaacaag
ccagggccttgcttcagccacaccaatctttcctctagcacactgaatgaagaacatctg
tgtaactatgcttggcatgataacatcagtaggaaaagccagaagtcttacagtcaaaag
agttcagaagagacggagccgcaggaactcttcctctaa
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