Tympanuchus pallidicinctus (lesser prairie-chicken): 128089508
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Entry
128089508 CDS
T08967
Symbol
SPTLC1
Name
(RefSeq) serine palmitoyltransferase 1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai00600
Sphingolipid metabolism
tpai01100
Metabolic pathways
tpai04382
Cornified envelope formation
Module
tpai_M00094
Ceramide biosynthesis
tpai_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
128089508 (SPTLC1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128089508 (SPTLC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tpai01007
]
128089508 (SPTLC1)
Enzymes [BR:
tpai01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
128089508 (SPTLC1)
Amino acid related enzymes [BR:
tpai01007
]
Aminotransferase (transaminase)
Class II
128089508 (SPTLC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_1_2
PAD
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
128089508
NCBI-ProteinID:
XP_052556994
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MVAAVGMGQQWILVEMVQAFYEAPAYHLILEGILILWIIRLIFSKTYKLQERSDLTPKEK
EELIEEWQPEPLVPPVSKDHPALNYNIVSGPPTHKIIVNGKECINFASFNFLGLLDNEKV
KSAAQASLKKYGVGTCGPRGFYGTFDVHLELEDRLAKFMRTEEAIIYSYGFATIASAIPA
YSKRGDIVFVDEAACFAIQKGLQASRSNIKLFKHNDMTDLERLLKEQETEDQKNPRKARV
TRRFIVVEGLYMNTGDICPLPELIKLKYKYKVRIFLEESLSFGVLGEHGRGITEHFGINI
DDIDLISANMENSLASIGGFCCGRSFIIDHQRLSGQGYCFSASLPPLLAAAAIEALNIME
DNPDIFQTLRAKCKRIHSALQGISGLRVVGESFSPALHLRLEGSYGSRENDVKLLKRIVD
YCENRGIALTQARYLEKEEKCLPSPSIRVVVTVEQTEQELDKAASLIKEAAESVLN
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggcggtgggcatggggcagcagtggatcctggtggagatggtgcaggccttc
tacgaggctcctgcataccatcttattttggaaggaattctaattctatggataatcagg
cttattttttccaagacatacaagcttcaagagcgatctgatctaacacctaaggaaaaa
gaagagttgattgaagaatggcagccagagcctcttgttcctcctgtatcaaaagatcac
ccagctctcaactacaacattgtttcaggtcctcctacccataaaatcattgttaatggc
aaagaatgtattaactttgcatcattcaattttcttggacttctggataatgagaaagtt
aagagtgcggctcaagcgtctttgaagaagtacggtgttggtacttgcggacctagagga
ttctatggtacttttgacgtgcacttagaattagaagaccggctagcaaaattcatgagg
acagaagaagctattatatactcatatggatttgcaacaattgccagtgcaattcctgcg
tattctaaacgaggggacatcgtgtttgtagatgaagctgcatgctttgctattcaaaag
ggattacaagcatctcggagtaatatcaaattatttaagcataatgatatgacagacctt
gaacgactgttgaaggagcaagagactgaagatcaaaagaatcctcgcaaagcccgtgta
actcgaaggttcattgtggtggaagggttgtatatgaatacaggagacatttgccctctt
ccggaattgataaaattgaagtataaatacaaagttagaatatttttggaggagagcctt
tcttttggagtccttggagaacatggaagaggaatcactgaacactttggaataaatatt
gatgatatagacctcattagtgcaaacatggaaaattcactggcttctattggaggattt
tgctgtggaagatcgtttataattgaccatcagcgattgtctggtcaaggctattgcttt
tctgcatccctgcctcctttattagctgctgctgctattgaggctctgaatattatggaa
gacaatccagacatttttcagactcttcgggctaaatgcaagcgaattcacagtgcttta
caggggatttctggcttaagagtagtgggagaatcattttctccagcattgcacctaagg
ttggaaggcagttatggatctcgagaaaatgatgtgaagttgctcaagagaattgtggat
tattgcgaaaatcgtggtattgcattaactcaggcccgctacctggagaaggaagaaaaa
tgtcttccttcacccagcattcgagtagtggtaacagtggaacaaacagaacaagaactg
gacaaagctgcatcacttattaaggaagctgcagagtctgtactgaattaa
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