Tympanuchus pallidicinctus (lesser prairie-chicken): 128089587
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Entry
128089587 CDS
T08967
Symbol
RNF38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpai04121
]
128089587 (RNF38)
Enzymes [BR:
tpai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128089587 (RNF38)
Ubiquitin system [BR:
tpai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128089587 (RNF38)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
VPS18_RING_C
zf-RING_UBOX
zf-C3H2C3
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
128089587
NCBI-ProteinID:
XP_052557140
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MERTTEEKAVPQQPVEGTVGELAVPQQPMEGTMGEQAVPPQPMEGTVGEQAVPPQPMEGT
VGEQAVPPQPMEGTEGEQAVPLQPMEGTVGEQGVPSQPMEGTVGEHTVLLQPMEETVGEQ
AVPLQPMEGTVGEQAVLLQLGKDRSGADLHTAAHEGTHSRTGSIASSFQCQSIHQDHICN
DDGDKSEDGPSPKRQRLSHSVFDYTAASPASSPPMRPWDMTSNRQPPLARPNQHHFSGER
CNTPARNRRSPPVRRQRTRRDRLSRHNSISLDENYHHLSYGQQQAIEEPRAFRPPNVSPR
ILRPAVHPPQQNAVMVDIHDQIHQGTVPVSYTVTTMAPHGIPLCTGQHIPACSTQQVPGC
SVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLLHPPHLSPHHPPHLPP
PGQFVPFQAQQSRSPFQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPL
HQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPHPYHPSLLPYVLSMFPVPPAVGRAFSIE
LDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCD
FESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRD
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggagagaaccacggaggagaaggctgtcccccagcagcccgtggagggtactgtaggg
gagctggctgtcccccagcagcccatggagggcaccatgggggagcaggctgttcctcca
cagcccatggaggggactgtgggggagcaggctgttcctccacagcccatggaggggact
gtgggggagcaggctgttcctccacagcccatggagggcaccgagggggagcaggctgtt
cctctgcagcccatggagggaactgtgggggagcagggtgttccttcacagcccatggag
gggactgtgggggagcacactgttcttctgcagcccatggaggagactgtgggggagcag
gctgttcctctgcagcccatggaggggactgtgggggagcaggctgttcttctgcagctc
gggaaggaccgcagcggagcagatctccacactgcagcccatgaaggaacccacagtaga
acaggtagcatcgccagttcctttcagtgccagtcaatccatcaagatcacatttgcaac
gatgatggcgacaagagcgaagacggtcccagccccaagcgacaacgcctttcccattca
gtcttcgactacacggcggcatcaccagcctcgtcaccaccaatgcgaccatgggatatg
acatcaaataggcagcctcctttggctcggcccaaccaacaccacttctcaggggaacga
tgcaacacacctgcacgaaacagaaggagtcctcctgttcgacgtcagagaactaggaga
gatcgtctgtctcgacataattccattagtctagatgaaaactatcaccatctctcctat
ggacagcagcaagcaatagaagagccccgagcttttcgcccaccgaatgtatctcctcgt
atattacgcccagctgttcacccaccacagcagaatgcagtgatggttgacattcatgac
cagatccatcagggaacagttcctgtctcctacacagtgacaacaatggctccacatggg
ataccactttgcacaggccagcacatcccagcctgcagcacacagcaggtcccagggtgt
tcagtggttttcagtgggcagcaccttccagtttgcagtgtgcctcctccaatgcttcaa
gcgtgctcagttcagcacctaccagtaccgtatgcagcatttccaccccttatttctagc
gacccattccttttgcaccctcctcatctgtctccacaccatcctcctcacttgcctccc
ccaggacagtttgttcctttccaagcacagcagtcacgttcgccatttcaaaggatagaa
aatgaagtagaactacttggagaacatcttcctgtaggaggttttacgtatcctccctca
gctcatccaccaacgttgcctccctcagcccctctccagttcttaactcatgatccttta
caccaggaagtgtcatttggcgttccttacccaccgtttatgcctcgaagactcacaggg
cgcagcagatacagatcacagcagccaatacctccacacccttaccatcctagtctacta
ccttatgtgctatcaatgttcccagttccacctgcagttggacgagctttcagcattgag
ctggatgtggaagatggagaggtagaaaactatgaggccctgctgaatttggcagaacgc
ctgggagaagccaaaccacgaggactgacgaaggcagacattgaacaactcccatcctat
aggttcaatccaaacaaccaccagtcagagcagacactgtgcgtggtgtgcatgtgtgat
tttgagtcaaggcagctacttagagtcttaccctgtaaccacgagttccatgccaagtgt
gttgataaatggcttaaggcaaatcgtacctgcccaatttgcagagctgatgcttcagaa
gtgcatcgtgattag
DBGET
integrated database retrieval system
