Tympanuchus pallidicinctus (lesser prairie-chicken): 128089641
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Entry
128089641 CDS
T08967
Symbol
TNPO1
Name
(RefSeq) transportin-1
KO
K18752
transportin-1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128089641 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128089641 (TNPO1)
03009 Ribosome biogenesis [BR:
tpai03009
]
128089641 (TNPO1)
Messenger RNA biogenesis [BR:
tpai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
128089641 (TNPO1)
Ribosome biogenesis [BR:
tpai03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
128089641 (TNPO1)
Pre-60S particles
128089641 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
IBN_N
Vac14_Fab1_bd
TOR1L1_N
TPR_IPO5
Cnd1
HEAT_EF3_N
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
HEAT_GCN1_C
MMS19_C
CEP104-like_TOG
Dopey_N
UNC45-central
HEAT_GCN1_C_2
RTP1_C1
VPS15-like_hel
ARM_TBCD
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
128089641
NCBI-ProteinID:
XP_052557234
LinkDB
All DBs
Position
Unknown
AA seq
896 aa
AA seq
DB search
MVWAAKMEYEWKPDEQGLQQILQLLKESQSPDTTTQRAVQQKLEQLNQYPDFNNYLIFVL
TKLKSEDEPTRSLSGLILKNNVKAHFHNFPNGVTDFIKSECLNNIGDSSPLIRATVGILI
TTIASKGELQNWPELLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNI
MIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMMHIDAFIENLFALATDEEPEVRKN
VCRALVMLLEVRMDRLLPHMISIVEYMLLRTQDQDENVALEACEFWLTLAEQPICKDVLC
RHLTKLIPVLVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIRPRFHRSRTVAQKHEEDGI
EDRDDDDDEIDDDDAISDWNLRKCSAAALDVLANVFRDELLPHILPLLKELLFHPEWVVK
ESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPP
DTYLKPLMTELLQRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQ
HKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIHKWNMLKDEDKDLFPLLECLSSVA
TALQSGFLPYCEPVYQRCVNLVQKTLAQAMLHNAQPDQYEAPDKDFMIVALDLLSGLAEG
LGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILG
TNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAIT
IGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMITVNPNGVFQDFIF
FCDAVASWISPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAYYGV
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgggcagccaagatggagtacgagtggaagcccgacgagcaggggctccagcag
atcctgcagctgctgaaggaatcgcagtccccggacaccaccacgcagagagccgtgcaa
caaaaactagaacaactcaatcagtatccagatttcaacaactacctgatttttgttctt
acgaagttgaagtctgaagatgaaccaacacgttccttgagtggtctcatcttgaagaat
aatgtaaaagcacattttcacaacttcccaaatggagtaactgacttcatcaaaagtgaa
tgtctgaacaacattggtgattcctctcccttaattagagctactgtaggtattctgata
acaaccattgcttcaaaaggagaattacagaattggccagaacttttaccaaagctttgc
agcctcttagattcagaggactacaatacttgtgagggtgcatttggcgctcttcagaag
atatgtgaagattctgctgaaattttagatagtgatgtattagatcgaccactcaatata
atgatacctaaattcttacagttcttcaagcacagcagtccaaaaataagatctcacgct
gttgcatgtgtcaatcaatttatcatcagtagaactcaagctcttatgatgcacatagat
gcttttattgagaatctttttgcactggctactgatgaggagcctgaagtacgcaaaaat
gtttgccgtgctctggtaatgttgctggaagttcgcatggatcgccttcttcctcatatg
attagtatagttgagtacatgcttctaaggacccaggaccaagatgaaaatgtggctttg
gaggcctgtgagttttggctgactttggctgaacaacccatttgtaaggatgttttatgt
cggcatcttactaagctgatacctgtgctggtgaatggtatgaaatattctgagatagat
attattttgctgaagggagatgttgaagaagatgaagcaattccagatagtgaacaggac
ataagacctcgttttcatcgttcacgaacagtagctcagaaacatgaggaagatggcatt
gaagatcgtgatgatgatgatgatgaaattgatgatgatgatgctatttctgactggaat
ttaaggaaatgttctgctgctgctctagatgttttggccaatgtatttcgtgatgaactt
ttgccacacatcctgccccttttgaaggaattgctcttccatcccgaatgggtagttaag
gaatcaggtatccttgttcttggagcaattgctgaaggctgcatgcagggtatgattccg
tatcttcctgagctgatccctcaccttattcagtgcctctctgacaaaaaggctcttgtg
cgctccattacatgctggactcttagtcgctatgcacactgggtagttagtcaaccccca
gacacatacttgaagccattaatgactgagttgctacagcgtatcctggatagcaacaag
agagtacaagaagctgcctgcagtgcctttgctactctagaagaggaggcttgtacagag
cttgttccttatcttgcatatatacttgacactttggtcttcgcatttagtaaataccag
cataaaaacctgcttattctttatgatgctataggaactctagcagattccgtaggccat
catctaaataaaccagaatatattcagatgctaatgcccccgttaatccacaagtggaac
atgttgaaggatgaagataaagatctctttcctttattagagtgcctgtcgtcagttgct
actgccttgcaatctggctttcttccatactgtgaacctgtgtaccagcgttgtgtaaat
ctagtgcagaagacccttgcacaagccatgttgcacaatgctcaaccagaccaatatgag
gctccagataaggacttcatgattgtggctcttgatttgctcagtggtttagctgaaggt
cttggaggcaacattgagcagctggtagctcggagcaatatcctgacactgatgtaccaa
tgcatgcaggataaaatgcctgaagtacgacagagttcttttgcactgttaggtgatctg
acaaaggcgtgttttcagcatgttaagccttgcatcgctgatttcatgcccattttggga
accaacctaaaccctgaattcatttctgtgtgtaacaatgctacctgggctattggagag
atctccattcagatgggtatagagatgcagccttatattccaatggtgttgcaccagctt
gtagaaataattaacagacccaacacaccaaagacattgttagagaacacagcaataaca
attggtcgtcttggttacgtttgtcctcaagaggtggcccccatgctacagcagtttata
agaccctggtgcacctctctccggaacataagagacaatgaggaaaaggactcagcattc
cgtgggatatgtaccatgatcacagtcaaccccaatggcgtattccaagactttattttt
ttttgtgatgctgttgcatcgtggattagcccaaaagacgatcttcgagacatgttctgt
aagattcttcatgggtttaaaaatcaagttggggatgagaattggaggcgtttctcagac
cagtttcctcttcccttaaaagagcgccttgcagcttactatggagtttaa
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