Tympanuchus pallidicinctus (lesser prairie-chicken): 128089656
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Entry
128089656 CDS
T08967
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpai02000
]
128089656 (TMC1)
03037 Cilium and associated proteins [BR:
tpai03037
]
128089656 (TMC1)
Transporters [BR:
tpai02000
]
Other transporters
Pores ion channels [TC:
1
]
128089656 (TMC1)
Cilium and associated proteins [BR:
tpai03037
]
Other cilia and associated proteins
Stereociliary proteins
128089656 (TMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Piezo_TM1-24
Na_K-ATPase
COX16
Motif
Other DBs
NCBI-GeneID:
128089656
NCBI-ProteinID:
XP_052557262
LinkDB
All DBs
Position
Unknown
AA seq
952 aa
AA seq
DB search
MPKNEKPATNEGNDASEVDNEEDSAAENQENDRGADKERKRAKPRTRRGHGRGRARHGGE
EDGDDEDGTRRAGQRRQRNRRGRSRAGGNEGSDSEGDPTKARKNQANQKSKEDGEEEEDE
KGGKSGKGKNEKKQDKKADKKGKKEKANKKKKDKKKSGSGSDSDSEEEPITEEELAKLKE
EVEEKKKLIATLRNKPWKMKKKLSVLKEAQLFVEKFEGALGKGKGKKFYAYKVMMTKKWM
KFQRDFENFKTACIPWEMKIKEIESHFGSSVASYFIFLRWMYGINMILFGLTFGLVMVPE
ALMGKPYGSLPRKTVPRAEEATAMNFATLWDFSGFAQYSVLFYGYYNNQRTIGWLKFRMP
LSYFLVGVGTIGYSFMIVIRTMARNANDDGGGDDTSFNFSWKMFTSWDYLIGNPETADNK
FASITTSFKEAIVEEQESRKEENIHLTRFLRVLANFLAMCTLAGSGYLIFFVVRRSQKFA
LEGLENYGWWERNEVNMVMSLLGMFCPTLFDVISSLENYHPRIALRWQLGRIFALFLGNL
YTFIIALMDEINLKLEEEKIVKYNMTIWEASLYNGTIPENSTAPPIQVDPADVPRGPCWE
TMVGQEFVRLTVSDTMTTYITILIGDFLRAVFVRFFNYCWCWDLEYGFPSYSEFDISGNV
LGLIFNQGMIWMGSFYAPCLPAINVFRLHTSMYLQCWAVMCCNVPQERVFKASRSNNFYM
AMLLFILFLSTLPAVYTIVSIPPSFDCGPFSGKTRMFEVISETLEHDFPSWFGKVFGYAS
NPGLILPFILLMVLSIYYLNATSKSYKEANLELKKKLQSQAEENKRRNKQKAQKSNEQEE
NPFETEPPQSKQKEGKQDESAANQDNKKEQSGNEAKKTGQQQEGSSSQAPQHPGTAPNGH
NPPQGRGNFLPPPIAVTRPPGPRGYAAPGYLPGHPRFPGVQPGMPRGPPHYR
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaaatgaaaagccagccaccaatgaaggaaatgatgccagtgaggtcgacaat
gaagaagacagtgcagccgagaatcaagaaaatgacagaggagcagataaagagaggaag
agagcaaaaccaagaaccagaaggggacatggaagaggaagagccaggcatggtggtgag
gaggatggagatgatgaagatggaacaaggagagctgggcaacgcaggcaaagaaaccgg
agaggacggagccgagcaggtggaaatgagggcagtgattctgagggggatcctacaaaa
gccaggaagaaccaggcaaatcaaaaatcaaaggaagatggtgaagaagaggaagatgaa
aaagggggtaagagtgggaaaggcaaaaatgagaagaaacaggacaaaaaggctgataag
aaagggaagaaagaaaaggccaacaagaagaaaaaggacaaaaagaaatcaggatctggc
tctgattctgactctgaggaggagccgattactgaggaggaattggccaaactgaaagaa
gaggtagaagaaaaaaagaagctaatcgccacattacgaaacaagccatggaagatgaaa
aagaagttgtcagttctaaaagaagcacagctttttgttgaaaaatttgaaggtgctctt
ggaaaaggaaagggaaaaaagttctatgcgtacaaagtgatgatgaccaagaaatggatg
aaattccaaagagattttgagaattttaagacagcctgcataccctgggaaatgaaaatt
aaagagattgaaagtcactttgggtcatcggtagcatcttatttcatattcttacgctgg
atgtatggaataaacatgattctctttggtctgacgtttggacttgtaatggtgcctgag
gcattgatgggaaagccatatggctctttacctagaaaaactgttccaagagctgaagaa
gctacagctatgaactttgctaccctttgggattttagtggctttgcacagtattctgtg
cttttttacggttattacaataatcagaggacaattggatggctcaagttcaggatgcct
ctttcctatttccttgttggcgttgggactattggctacagctttatgattgtcattcga
acaatggcaaggaatgcaaatgatgatggtggtggggatgatactagctttaatttcagc
tggaaaatgttcacaagctgggactacctgattggcaatcctgagacagcagataataag
tttgcttccatcactaccagctttaaggaagctatcgtggaggagcaggagagccgtaag
gaggaaaatattcacttgactcggttcctgagggtgcttgctaacttcttagccatgtgc
acacttgctgggagtggctacctcatattttttgttgtgagaagatcccagaaatttgcc
ctggaaggtctggagaactacgggtggtgggaaagaaatgaagtaaacatggtcatgtca
cttttgggaatgttctgtccaaccttatttgatgtaatcagttctctggaaaactaccac
cctcgaatagctctaagatggcagcttggacgcatatttgctctttttcttggcaatctc
tacactttcattattgccctaatggatgaaatcaatctcaagttggaagaagaaaagata
gtcaagtataacatgacaatatgggaagccagtctgtacaatggcactattccagaaaat
tcaactgctcctccaatacaggtggaccctgcagacgttcctagaggaccatgttgggaa
acaatggtaggccaggagtttgtacggctgacagtctctgacacgatgacaacatacatc
acaattctaattggtgatttcttgagagctgtctttgttaggtttttcaattactgctgg
tgctgggacttggaatatggatttccatcatattcagaatttgatataagtgggaatgtg
cttggactgatatttaatcaaggcatgatctggatgggatctttttatgctccatgtctc
ccagcaatcaatgtgttccgactccatacttcaatgtacctgcagtgctgggcagtgatg
tgctgcaatgttccccaggagagagtcttcaaagcctccagatcaaacaacttctacatg
gccatgttgcttttcattctctttctttctacactgcctgctgtgtacaccattgtctcc
attccaccatcttttgactgtggccctttcagtgggaaaacaagaatgtttgaagtcata
tcagaaactctggagcatgacttcccttcttggtttgggaaggtatttggttatgcctct
aaccctggactcatcctaccttttatattactgatggtcctgagtatttattatcttaat
gctacatccaagtcctacaaggaagctaacctggaacttaaaaagaaactacaaagtcaa
gcagaagaaaataaaagaagaaataaacaaaaggcgcaaaaatcaaatgaacaagaggaa
aatccatttgagacagagccaccacagtcaaagcaaaaagaaggcaagcaagatgaatct
gctgcaaatcaagataacaagaaagaacagagtggcaatgaagcaaaaaaaacaggtcag
caacaggaaggaagttcctctcaggcaccacagcatccaggcactgccccgaatggccac
aatccaccacagggcagaggaaactttcttcccccacccatcgctgtgactcggccacca
gggccacgagggtatgcagcaccaggctatctacctgggcacccacgctttccaggggta
cagccaggaatgcccaggggacctccccactacagataa
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