KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128089756
Entry
128089756         CDS       T08967                                 
Symbol
APTX
Name
(RefSeq) aprataxin
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    128089756 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tpai03400]
    128089756 (APTX)
Enzymes [BR:tpai01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     128089756 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     128089756 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     128089756 (APTX)
DNA repair and recombination proteins [BR:tpai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     128089756 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     128089756 (APTX)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT zf-C2H2_4 FHA zf-C2H2_6 zf-C2H2
Other DBs
NCBI-GeneID: 128089756
NCBI-ProteinID: XP_052557435
LinkDB
Position
Unknown
AA seq 350 aa
MRACWLVGTEEHGLRVPLPHMAAVLLGRGPRTRIADRRCSRQQVLLKADCNKGYVTVKQI
GVNPTSVDLVDIGKDEEVKMRPGQVLHLVNKLYPFVVQFGEESEGTVTEAEEKTQPEKRP
CEDSYENDEVENVPRKAKKMEVADTQSSSAGPGPSKSSVCAHEGTTSRKEHLGHWSQGLK
SAMQDPKVQVYKDEKAVVIKDKYPKARYHWLILPWDSISSLKSVTREHLGLLEHMHAVGQ
KMIQRCPAEESPQFRLGYHAVPSMSQLHLHVISQDFDSPALKTKKHWNSFTTEYFLNSED
VIEMVRSKGKVTVNDQASELLKLPLRCHLCKQQLSTIPQLKEHLKKHRTK
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgcgtgcctgctggctggtggggacagaggagcacgggctgcgcgtgccgctgccgcac
atggccgccgtgctgctgggccgcgggccgcgaacccgtatcgccgacaggaggtgctcg
cgacagcaagttctgttgaaagcagactgtaacaaggggtatgtcacagttaagcagata
ggagtcaacccaactagtgtcgacttagtggatattggcaaggatgaagaggtgaaaatg
aggccaggccaagttctgcatcttgtgaataaactttaccccttcgtggtgcaatttggt
gaagaatcagagggaactgttacagaagcagaagagaaaacacagcctgaaaagaggcca
tgtgaagactcctatgagaacgacgaagtagaaaatgtgcccagaaaggcaaagaagatg
gaggtggcggatacacaaagcagttctgcaggccccgggccaagcaagagcagtgtatgt
gcacacgaagggacaacgagcagaaaggaacatttaggacactggagtcaaggtctgaag
agtgccatgcaagatcccaaagtgcaggtttataaggatgagaaggctgtcgtcatcaag
gataaatatcccaaagcacgttaccactggcttattttaccgtgggactccatctcaagc
ctcaaatcagtcaccagagagcaccttgggctcctggaacacatgcatgcagtcgggcag
aaaatgattcagcggtgccccgccgaagaaagcccgcagttccggctgggttaccacgcc
gttcccagcatgagtcagctgcatttgcacgtaatcagccaagactttgattctcctgct
ctgaaaaccaaaaagcattggaactcctttaccacagaatacttcctgaactccgaagat
gtgatagagatggtacgaagcaagggaaaagtaacggtgaatgaccaggcctctgaactt
ctcaaattgcctctcagatgccatctctgcaaacaacagctgtccactatcccgcagctg
aaggaacatctcaagaaacatcggacaaaatga

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