Tympanuchus pallidicinctus (lesser prairie-chicken): 128089836
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Entry
128089836 CDS
T08967
Symbol
CLSTN3
Name
(RefSeq) LOW QUALITY PROTEIN: calsyntenin-3
KO
K22661
calsyntenin 3
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tpai04515
]
128089836 (CLSTN3)
Cell adhesion molecules [BR:
tpai04515
]
Cadherins
Cadherin related
128089836 (CLSTN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
SMN_G2-BD
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
128089836
NCBI-ProteinID:
XP_052557599
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MLQWRGGAAAEPPSSRARAWAGPGXRRCPAPPGGPGAAAAVAAAAAAAAAMGGRRPRAAV
LLPLLCLWAALPGGCPNKANKHKPWIEAEYQGIVMENDNTVLLNPPLFALDKDAPLRYAG
EICGFRIHGAGVPFEAVILDKATGEGLIRAKEPVDCEAHKEHTFTIQAYDCGEGPDGTNT
KKSHKATVHVRVNDVNEFAPVFVEKLYRVAVTEGKLYDRILRVEAIDGDCSPQYSQICYY
EILTPNIPFLIDNDGNIENTEKLQYSGDRLYKFTVTAYDCGKKRASDDAEVEIQVKPTCK
PSWQGWNKRIEYTPGAGSLALFPSIHLETCDEPLWNIQAMVELQTNHVAKGCDRDNYSEK
SLRKLCGAASGEIDLLPVPSPTANWTARLSVHYSQDSSLIYWFNGSQAAQVPVMNGLNAH
EGLSDHFTLSVWMKHAVVPSKGRREEETVICSTVQSEDGYSHYSLAVHGCRIAFLYWPLL
ESARPVKFLWKLEQVCDDEWHHYALNLEFPTVTLYVDGVSYDPALIHDNGLIHPPRPEPS
IMIGACWAEEKTKEKTKGNENSTDTIRGDPLLIHHYFHGYLAGFTVRPGSLESREVIECL
YACREGLDYSDFDSLGKGMKVHVNPSQSLLTLEGDDVETFNHAIQHVAYMNSLRFATPGV
RPLRLTTTVKCFSEESCVSIPDVEGYVVVLQPDAPQILLSGTAHFAHPASDFEAPDGVPL
FPNLQITCSISHQVETKKDENWHGTVTDTRMSDEIVHNLDGCEISLVGDDLDPEREYLLL
DGALLQQRGLELVNTSAYLTITGVESIAVYEEILRQVSYHINRGAALYERKFHLSCTEMN
GRYSSNEFSVEMSVLHNMNQAAHPNHMLNSQQFIHRGHHLPPELSGHSLASTHNNSMVPS
AATIIIVVCVGFLALLVILGILRIHSLHRQGMGQEVPEAAAEGHTGTGSKESDLFWDDSA
LTIIVNPMESYQGRQERAAENCEGRAGEGMEEDDDSSDLDTPDSPDSNDMDGRHIIGKND
SAHRY
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagtggcggggcggggccgcagcggagccgccgagcagccgagcgagggcgtgg
gccgggccgggcnnccgccgctgtccagcaccgccgggcgggccgggagcagcagccgcc
gtcgccgccgccgctgccgccgccgccgctatgggaggccgtcggccccgcgcagccgtc
ctgctgccgctgttgtgcctctgggccgcgctgcccggcggctgccccaacaaagcaaat
aagcacaaaccctggattgaagctgaatatcagggcatcgtcatggagaatgacaacaca
gtcctactcaacccaccgctgtttgcactggacaaagatgctcctctgcgctatgcaggt
gagatctgtggcttcaggatacatggggcaggggtgccctttgaagctgtgatactggat
aaagctacaggtgaggggctgatccgggccaaggaaccggtggattgcgaagcacataag
gagcacacattcaccatccaagcttatgactgtggagaaggacctgatggaaccaacact
aaaaaatcacacaaggccacagtgcatgttcgagtaaatgatgtgaatgaatttgctcct
gtctttgtggaaaagttgtatcgtgtcgcagtgaccgagggaaagctgtatgaccgcatc
ttgcgtgtggaggccattgatggagactgctcaccacagtacagccagatctgttactat
gagatcctgacccccaatattccctttctgattgacaatgatgggaacattgaaaataca
gagaaacttcagtacagtggagatcgtctctacaaattcacagtaacagcctatgactgt
ggaaaaaagcgggcatctgatgatgctgaagtggaaatccaggtgaaacccacctgcaag
cccagctggcagggctggaacaagaggattgagtacacgccgggtgcaggcagcctcgca
ctatttcctagcattcacctggagacctgtgatgagcccctgtggaatatccaggccatg
gtggagctgcagacaaaccatgtggctaagggctgtgaccgggataactactctgagaaa
tcactacgcaaactctgtggtgctgcctcaggagagattgacttgctgcctgtgcctagt
cccacggcaaactggactgcacggctctcagtgcactacagccaggacagcagcctcatc
tactggttcaatggcagccaggctgcccaagtacctgtcatgaatgggctgaatgctcat
gaggggctgagtgaccacttcaccctgtctgtgtggatgaaacatgctgtggtgcccagc
aaaggcagacgggaagaggagacagtgatctgcagtacagtgcagagcgaggatggctac
tcgcattactctctggctgtgcatggctgccgaattgctttcctctactggccattgctg
gagagtgcaaggcctgtgaagttcctctggaagcttgagcaggtctgtgatgatgaatgg
caccattatgctctcaacctcgagtttccaactgtcacactctacgtggatggtgtctct
tatgaccctgccctcatccatgacaatggcctcattcatcctccacggccagaaccctca
atcatgattggagcctgctgggcagaggagaaaaccaaggagaaaaccaaaggaaatgag
aattccactgatactatacgaggagatcctctgttgatacaccactacttccatggttac
ttggctggcttcactgtacgccctggtagcttggagagccgggaggttattgaatgcctg
tatgcctgccgtgaggggcttgattacagtgacttcgacagtctgggcaaagggatgaag
gttcatgtgaacccctctcagtccttgctcactttggagggtgatgatgtggaaaccttc
aaccatgctatccagcatgtggcttacatgaattcactgcgctttgctactcctggagtc
cggccgctcaggctcactactactgtcaagtgtttcagtgaagaatcatgtgtctccatt
cctgacgtggaaggttatgttgtggtgctacagcctgatgccccccagatcctgttgagt
ggcactgcccactttgctcatcctgcatcagactttgaggctcctgatggagtccccctt
ttccccaacctccagatcacctgctctatttctcaccaggtggagaccaagaaggatgag
aattggcatggcactgtgacagacacacgtatgtcagatgagattgtacacaacctggat
ggctgcgagatctcattggtaggagatgacttggacccagagagggaatatctgctcctg
gatggggcattgctgcaacagaggggcctggagctcgttaacacctctgcctacctcact
atcacaggggtagagagcattgcagtttatgaggaaatactacgccaggtctcataccac
atcaaccgtggcgctgctctttatgaaaggaagttccacctgtcctgcactgagatgaat
ggacgttattccagcaatgagttttctgttgagatgagtgtcctccacaacatgaaccaa
gctgctcatcctaaccatatgctcaattctcagcagtttatacaccgaggccatcattta
cccccagagctatctggccacagcttggcaagcacccataacaactctatggtccccagt
gcagccactatcatcattgtggtgtgcgtgggcttcctggcactcttggtgatcctgggc
atcctccgcatccactccttgcaccgacagggaatggggcaagaggtccctgaggctgct
gcagaggggcacacaggcaccggcagcaaagagagcgatttgttctgggacgactcggcc
ctcaccatcatagtgaacccaatggagtcctaccagggccgtcaagagagggctgcagaa
aactgtgagggcagagcaggtgagggcatggaagaagacgatgacagcagtgatttggac
actcctgactccccagacagcaatgacatggatggtcggcacatcattggcaaaaatgac
agtgctcaccgctattag
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