Tympanuchus pallidicinctus (lesser prairie-chicken): 128089872
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Entry
128089872 CDS
T08967
Symbol
NOP2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpai03009
]
128089872 (NOP2)
Enzymes [BR:
tpai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
128089872 (NOP2)
Ribosome biogenesis [BR:
tpai03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
128089872 (NOP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
FtsJ
Methyltransf_25
PCMT
TRM5-TYW2_MTfase
Methyltransf_15
BMT5-like
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
128089872
NCBI-ProteinID:
XP_052557666
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MGRKLDPSRKEKRGPGRKARKQRGAEVELARFLPPEAESGRKKLSSHARRRAAKRRLGVV
GRTAPGGGRRPAVKEQGDSQKEVSPIKTVGHAPERQSGFKDDNAKWLTPAKGKKSLSKRT
SVELSSNGEVEEDSWEMEEEEEDGSSEELMDDYGASSSDEEELLPIEKAALKQKAEDLSE
DDSEEDEVAEETSRQKTGQKEKEDADLQLNMEIDEEFKLPTDEQIEKETAEPPDLHVIHQ
RIKSNMEVLQDFGVKREEGRTRQEYLALLRRDMAAYYSYSDFLLKMLMDIFPLPELINFL
EANEVPRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVIYDSSVPIGATPEY
LAGHYMLQGASSLLPVMALAPQENERILDMCCAPGGKTSYIAQLMKNTGMILANDSNAER
LRSVVGNLHRLGVTNAVVSNCDGRQFPKVLGGFDRVLLDAPCSGTGVISKDPAIKTNKDE
KDILRCAHLQKELLLSAIDSVNATSETGGYVVYCTCSITVEENEWVVDYALKKRNVRLVA
TGLDFGKEGFTRFKDRRFHPSLKSTRRFYPHTHNMDGFFIAKLKKFSNSIPKTQKDEELA
AEAANPSTGPETVMEPQAKKKKLESSKIAQAQKKPQPALKNRRSLQGQRRPLKSVRPSPH
KSYAQVPNRKKHKVKQNGQ
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggggcggaagctggacccgagcaggaaagagaagcgcggccccgggcgcaaggcccgc
aagcagcggggagccgaggtggaactggcccgcttcctgccgcccgaggcggagagcggc
cggaagaagctgtccagccacgcgcggaggagggccgccaagagacgactgggggtggtg
gggcggactgcgccgggaggaggtcggcggcccgcggttaaagagcagggggattctcag
aaggaggttagtcccataaagacagtgggacatgcccctgagcgccagtctggcttcaaa
gatgataatgcaaaatggctgaccccagccaaaggcaagaagagcctctccaagagaacc
agcgtggagttatccagcaatggtgaggtggaagaggacagctgggagatggaggaggag
gaagaggatgggagcagcgaggagctgatggatgattatggtgcctcatcttctgatgag
gaagaattgctgcccattgagaaagccgccctgaagcaaaaggctgaagatctcagtgaa
gacgatagtgaggaagatgaggtggccgaggagaccagcaggcagaaaacaggacagaag
gaaaaagaagatgcagatctgcagctcaacatggagatagatgaagaattcaaattgcca
actgatgaacagattgagaaagagactgctgagccaccagacctgcatgtcattcaccaa
cgcatcaagagcaacatggaggtgctgcaggactttggggtgaagcgggaggaaggacgc
acacgacaggagtaccttgcactgttgcgccgggatatggctgcttactactcctacagt
gacttcttgctcaagatgctcatggatatcttcccactccctgagctaatcaactttctg
gaagccaacgaggttccccgtcccgtgaccattcgcaccaacacactcaagacgcgacga
cgggacctagcgcaggctctcatcaaccgtggtgtgaatctcgaccccttggggaagtgg
tcaaaaactggacttgttatttatgactcctccgtgcccattggtgccacccctgaatac
ttggctggacactacatgctgcaaggagcttccagtctcctccctgttatggctctggct
ccacaggagaatgagcgcatcctggatatgtgctgtgccccgggtggcaaaaccagctac
atagctcaacttatgaagaatacagggatgatcttggccaatgacagcaatgctgagcgg
ctgcgtagtgtggtggggaatttgcatcggctgggtgtcaccaatgcagtagtgagtaac
tgcgatggacgccagtttcccaaggtacttggagggtttgaccgtgtgttgcttgatgct
ccctgtagtggaacaggtgtcatttctaaggatcctgctatcaaaaccaataaggatgag
aaagacatcctgcgctgcgctcacttgcagaaggagctgcttctcagtgctatagattca
gtcaatgccacctcagagacggggggctatgttgtctactgcacgtgctccattacagtg
gaagagaatgagtgggttgtggattatgccctgaagaaacgcaatgttcgtttggtggcc
acaggactggactttggcaaggaaggcttcaccaggtttaaggaccgtcgtttccatccc
tctcttaagtctacacggcgtttctatccccacacccataatatggatgggttcttcatt
gccaagttaaagaaattctctaattccatccccaagacgcagaaagacgaagagcttgct
gcggaagcagcaaatccgtccactggccctgagacagtcatggagccacaggcaaaaaag
aagaaacttgagtcgtcaaaaattgcccaagcacagaagaagccacagcctgctttgaag
aatagacgttctctgcagggtcagaggaggcccttgaagtctgtccggccttctccccat
aagtcttatgctcaagtccctaacagaaagaagcataaggtgaaacagaacggacagtga
DBGET
integrated database retrieval system
