Tympanuchus pallidicinctus (lesser prairie-chicken): 128089935
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Entry
128089935 CDS
T08967
Symbol
FBXO40
Name
(RefSeq) F-box only protein 40
KO
K10315
F-box protein 40
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpai04121
]
128089935 (FBXO40)
Ubiquitin system [BR:
tpai04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128089935 (FBXO40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box
F-box-like
Motif
Other DBs
NCBI-GeneID:
128089935
NCBI-ProteinID:
XP_052557774
LinkDB
All DBs
Position
Unknown
AA seq
749 aa
AA seq
DB search
MEQAAQGSGHGPKLLEFKAFRHQLALTHLTSTLLSKTKRASVWYKHRDSMIKHRALKAPP
GQHRHCERCFSRHCRAPIETSVSCMVISCHLHCGATFHMCKQEEHQLLCPLEHVPCLNAH
YGCPFSMARFKLAKHLQICPASVVCCSMEWNRWPNVDSDTTLHKNIMKESLSEECLDTAL
ALRDQKILFRNLKVADLFPEWRKKEEVGKLMEEAMDGIEGAVGGLACGSQEGSDQFSELS
QSERENLAKDKEGMDLGSYKTWENIFSKELLACQVTGSATSAGKKKEEASKQKASSSCTA
VSAEKAKEVPCNTEEAKDQKPEQTANKEMTGLAPWQEGVLERLKKEVGVGDYNMYLVHHG
GMLIRFGQMAACTPKEKDFVYGNLEAQEVKTVYTFKVPVSYCGKRARLGDVMAHKIPTSD
KSVDTSELGINPEELPKADVVTATLLCALEKELKGHEISEARGIDGLFVDFGTQTYNFPL
EPFSCNAVLADIVDESSQPELHVELYTESVTRRHNKSSSAFTFTCNHFFRRDEYASHFKN
VHADIQSCLDGWFQLRCPLAYLGCTFVQNHFRPDGHKAKVIYSKLLNTFAIKPEVDTTLA
ESEKCNFKVDDRGRTKDLLSSLPLEVLKYIAGFLDSFSLSQLSQVSVLMRDICATLLQER
GMVLLVWEKKRYSHGGTSWKARRKKWQFSSLFSRVDRWQLSDMVCMSEHLKECPFYKVER
KTDPVLLTGMCETPQQVQKTLVSTFKCRV
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggctgcccagggcagtgggcacggtcccaagctgctggagttcaaagctttc
agacatcagttagcccttacccacctcacttcaaccctgctgagcaaaaccaagagagca
agtgtttggtacaaacacagggactctatgattaagcacagggctctgaaagctcccccc
gggcagcacaggcactgcgagaggtgcttcagtcggcactgccgcgcacccattgagacc
tctgtctcctgcatggtgatcagctgccaccttcactgtggtgccaccttccacatgtgc
aagcaagaggagcaccaactgctctgccccttggagcacgtcccctgcctcaacgcacac
tatggatgtcctttctccatggcccgctttaagctggcaaagcaccttcagatatgccca
gccagcgttgtctgctgctcaatggagtggaatcgctggccaaatgtggattcggacaca
accctccacaagaatattatgaaggagagcttgagtgaagagtgtctggacacagcattg
gcactcagagaccagaagatacttttcaggaatttgaaagtagctgacttgtttccagag
tggaggaaaaaggaggaggtgggaaagctaatggaagaagccatggatgggatagaaggt
gctgtgggaggattagcctgtggttcccaggaaggcagtgaccagttctctgagctcagc
cagagtgagcgtgaaaatttggcaaaggacaaggaaggaatggacctagggagctacaaa
acctgggagaacattttcagcaaagagctcttggcttgccaggtaacaggctcagcaacc
agcgcaggaaaaaagaaggaagaggcttccaagcaaaaagcatccagctcttgtactgcc
gtctctgcagagaaggcaaaggaagtaccttgtaacacagaagaggcaaaagaccaaaag
cccgaacaaacagcaaataaagaaatgacagggctggctccttggcaagaaggggtcctg
gagaggctgaagaaagaagttggtgtaggtgattacaacatgtatcttgtgcatcatggg
ggaatgctcattcgctttggccaaatggctgcttgcacacccaaagaaaaagactttgtg
tatgggaacttggaagctcaagaagtaaagactgtctataccttcaaagtgccagttagt
tactgtggcaaaagagcacgactgggagatgtaatggcacacaagatacctacttcagat
aagtcagtggatacctcagaattgggaataaacccagaagaactacctaaggcagatgta
gtgacagccacactgctgtgtgcactggaaaaagaactgaaagggcatgagatctctgaa
gcaagaggtatcgatggactctttgtagacttcggaacacagacatataactttccttta
gagcctttttcctgtaatgctgttctagcagatattgtagatgaaagcagccaaccagaa
ctccacgtggagctgtacaccgaaagtgtaaccagaaggcataataaaagtagttcagct
ttcacattcacttgcaatcatttcttcaggagggatgaatatgcatcccatttcaagaat
gtgcatgctgacatacagtcatgtctggatggatggtttcagcttcgctgtccactggcc
tacctgggatgtacttttgttcaaaatcacttccgccctgacggacataaggccaaggtc
atatacagcaagcttctcaatacattcgctattaaaccagaggttgacaccacccttgct
gagtcagaaaagtgcaatttcaaagtggatgatcgagggagaaccaaggacttgctgagc
agcctcccattggaagtgctcaagtacattgcagggttcctggacagctttagtttatct
cagctatcacaagtgtcagtgctgatgagagacatctgtgccactcttcttcaggagagg
ggtatggtcctgcttgtttgggagaaaaaaagatattcccatggtggtacttcatggaaa
gctcgcagaaagaagtggcagttcagcagcctcttctccagagtggaccggtggcagctc
agcgatatggtctgcatgtcagagcacctgaaggaatgccctttctacaaagtggagcgc
aagacagaccccgtgctgctgaccggcatgtgtgagactccacagcaggttcaaaagact
ttggtttccaccttcaaatgcagagtgtga
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