Tympanuchus pallidicinctus (lesser prairie-chicken): 128090129
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Entry
128090129 CDS
T08967
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7 isoform X1
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03018
RNA degradation
tpai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128090129 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
128090129 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128090129 (LSM7)
03041 Spliceosome [BR:
tpai03041
]
128090129 (LSM7)
Messenger RNA biogenesis [BR:
tpai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128090129 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
128090129 (LSM7)
Spliceosome [BR:
tpai03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
128090129 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
128090129
NCBI-ProteinID:
XP_052558161
LinkDB
All DBs
Position
Unknown
AA seq
116 aa
AA seq
DB search
MANVGGGGGGAGKMADKEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLV
LDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtcggagggggcggcggtggtgcgggcaagatggcggataaggagaagaag
aagaaggagagcattttagatctctccaaatacatcgacaaaacgatccgggtgaagttc
cagggtgggagagaagcaagtggtgtcttgaaaggatttgaccctctactgaaccttgtg
cttgatggtaccattgaatatatgcgagacccagatgatcaatacaaattaacagaagac
acacgtcagctgggacttgtggtctgcagagggacttctgtggttctcatttgcccacag
gatggaatggaagcgattcccaaccctttcattcagcagcaagatggataa
DBGET
integrated database retrieval system
