Tympanuchus pallidicinctus (lesser prairie-chicken): 128090290
Help
Entry
128090290 CDS
T08967
Symbol
CACNA1S
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1S isoform X1
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04010
MAPK signaling pathway
tpai04020
Calcium signaling pathway
tpai04260
Cardiac muscle contraction
tpai04261
Adrenergic signaling in cardiomyocytes
tpai04270
Vascular smooth muscle contraction
tpai04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128090290 (CACNA1S)
04020 Calcium signaling pathway
128090290 (CACNA1S)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
128090290 (CACNA1S)
09153 Circulatory system
04260 Cardiac muscle contraction
128090290 (CACNA1S)
04261 Adrenergic signaling in cardiomyocytes
128090290 (CACNA1S)
04270 Vascular smooth muscle contraction
128090290 (CACNA1S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpai04040
]
128090290 (CACNA1S)
Ion channels [BR:
tpai04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128090290 (CACNA1S)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
128090290
NCBI-ProteinID:
XP_052558482
LinkDB
All DBs
Position
Unknown
AA seq
1928 aa
AA seq
DB search
MRSTRPPRNAPGKEATAAGVLLLPQELRQHPGARDLNLNLCFVCCARERSLQPPESGSSE
RGIWRSSGWLGLGAQPWGERRRNSVGRTTMEPASHQDDAKKRQQKEKSKKPVPPVAPRPA
RALFCLTLQNPLRKACISIVEWKPFEIIILLTIFANCVALAIYLPMPEDDTNVANSSLEK
FEYAFLIFFAIEAMLKIIAYGFLFHTDAYLRNGWNVLDFSIVSLGLVTMTLEQINAKEGG
SLGGKGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFMIIIYA
IVGQELFKGKMHKTCYYLGTDVIATVGSEKPAPCTISGHGRHCSINGTECRGGWPGPNNG
ITHFDNFGFAMLTVYQCITMEGWTEVLYWVNDAIGNEWPWIYFVSLILLGSFFVLNLVLG
VLSGEFTKEREKAKSRGTFQKLREKQQLEEDLKGYMDWITHAEVMDSHRTRGEGMMPLDE
GGSETESLYEIEGMNKWILYFRQWRRWNRMFRRKCRHVVKSKFFYWLVILLVALNTLSIA
SEHHFQPEWLTIVQDNANRVLLALFVAEMLLKMYALGLRQYFMSLFNRFDCFVVCAGVLE
IILVELSTLSPLGISVLRCIRLLRIFKITRYWTSLSNLVASLLNSVRSIASLLLLLFLFI
IVFALLGMQLFGGMYDFEDMEVRRSTFDNFPQALISVFQILTGEDWNSIMYNGIMAYGGP
SFPGMLVCIYFIILFVCGNYILLNVFLAIAVDNLAEAESLTSAQKAKAEERKRRKMSRGY
PEKSEDEKQMLAKKLEQKAKGEGIPTTAKLKVDEFESNVNEIKDPYPSADFPGDDEEDEP
EIPLSPRPRPLAELQLKEKAVPMPEASSFFIFSPTNKFRMLCHRIVNATWFTNFILLFIL
LSSISLAAEDPIRAESFRNQILGYFDIGFTSVFTVEIVLKMTAYGAFLHKGSFCRNSFNI
LDLLVVAVSLVSMGFESSTISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGN
IVVVTTLLQFMFACIGVQLFKGKFYSCTDPSKLTEKECRGHFINYVDGDPTQIELKERVW
FHNAFHFNNVFSAMMSLFTVSTFEGWPELLYRAIDTNDENKGPIYNYRVEIAMFFIIYII
LIAFFMMNIFVGFVIVTFQEQGESEYKNCELDKNQRQCVQYALKARPLRRYIPKNPYQYQ
IWYVVTSSYFEYLMFFLIMLNTICLGMQHYNQSAEMNHVSDILNVAFTVLFTLEMMLKLM
AFKAKGYFGDPWNVFDFLIVIGSIIDVILSEIDTVLASSGGLYCLGGGCDNIDPDDNSRV
SITFFRLFRVMRLVKLLSRGEGVRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQMFG
KIAMVDGTQINRNNNFQTFPQAVLLLFRCATGEAWQEILLDCSYGKRCDPESDYAEGEEY
TCGTGFAYFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYD
PEAKGRIKHLDVVTLLRRIQPPLGFGKFCPHRVACKRLVCMNMPLNSDGTVTFNATLFAL
VRTALKIKTEGNFEQANEELRTIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQ
EHFRKFMKRQEEYYGYRPKKNPVEIQAGLRSIEEEAAPEIHRAISGDLTAEEELERAMVE
AAMEEGIYRRTGGLFGQVDSFLEPSSPLQPHMASQRPLQFTEVGSEDLDSPVFLDDFPQE
GNTNVNNANWLQGLEYEDEVLRRAVLAAPRPPARETDLPIPLERLRRRRGAASEHHPASG
QCLHPQQGSTVTAAASSSEHRWHESTDTNTSSTPAITFLIQEALISGGLAALARDPSFVA
VTRDEMAASSQLEVDEVEKAAVELLKGREALWDTESSSAPRDTLAASEVSAPGLSVATSH
QTSSAARL
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagcactcgcccgcctcgcaatgcgccgggtaaggaagcaacagctgctggggtc
cttttgctgcctcaggagctgcgacagcacccgggagccagggatctaaatttaaatctg
tgctttgtgtgctgtgcacgcgaacgcagcctccagcccccagagtccggctcctcagag
agggggatctggaggagctctggctggctggggctgggggctcagccgtggggtgagagg
aggagaaacagcgtggggagaaccaccatggagcctgcgtcccaccaggatgatgcaaag
aagaggcaacagaaggagaagtccaagaaaccggtgccaccagtagcccctcggccagcc
agggctctgttctgcttaaccctacagaacccactgcggaaggcatgcatcagcatcgtg
gagtggaaaccttttgagatcatcatcctcctgaccatcttcgccaactgcgttgccctg
gccatctacctgcccatgccggaggatgacaccaacgtggccaactccagcctggagaag
ttcgaatatgccttcctgatcttctttgccatcgaggccatgctcaagataatagcttac
gggtttctgttccatacggatgcctatctccgaaatggctggaatgtgctcgacttctcc
atcgtgtccctggggcttgtcaccatgaccctggagcagatcaatgcaaaggagggaggg
tctctgggagggaaaggtggctttgatgtgaaggccctgcgagcatttcgtgtgctgaga
cctctgcgcctggtgtctggagtgccaagtctgcaggttgtcctgaactccattatcaaa
gccatggtgcctctgctgcacatcgcgctgctcgtcctcttcatgatcatcatctatgcc
attgtggggcaagagctcttcaagggcaagatgcacaagacctgctactacctcgggaca
gatgtgattgccacagtagggtcagagaagccagccccctgcacaatctctggccatggg
cgtcactgctccatcaatggcaccgagtgccgaggcggctggccgggacccaacaacggc
atcactcacttcgataactttggctttgccatgctgactgtctaccagtgcatcaccatg
gagggctggaccgaagtgctctactgggttaacgatgccattgggaatgaatggccctgg
atctactttgtcagccttattttgcttggttccttctttgttctcaacctggtgctgggg
gtgctcagtggggagttcaccaaagagcgtgagaaggccaagtcacgaggcacatttcag
aagctgcgggagaagcagcagctggaggaggatctgaagggctacatggactggatcacc
catgcagaggtgatggacagtcaccggaccagaggagaaggtatgatgccgctggatgaa
ggagggtcggagacagagagcttgtatgaaatcgagggcatgaacaaatggattctctac
ttccggcagtggaggcgttggaaccgaatgtttcgtaggaagtgcaggcatgtggtgaaa
tccaagttcttctactggctggtcatcctgctggtggcactgaacaccctctccattgcc
tctgagcaccatttccagcccgaatggctgacgattgtacaagacaacgccaaccgggtg
ctgcttgctctctttgtggccgaaatgctgctgaagatgtacgcgctgggcctgcgccag
tacttcatgtccctcttcaaccgcttcgactgctttgttgtgtgtgcgggggtcctggag
atcatcctggtggagctcagcactttgtcacccctgggcatctctgtgctgcgctgcatc
cggctgctccgcatcttcaagatcaccaggtactggacgtcactgagtaacctggtggcc
tctctgctcaactcggtgcgctccattgcctctctgctactccttctcttcttgttcatc
attgtctttgccctgttgggcatgcagctctttgggggcatgtatgactttgaggacatg
gaagtccgacgcagcacatttgacaacttcccccaggccctcatcagtgtcttccagatc
ctgactggagaggactggaattcaataatgtacaatgggataatggcttatgggggccca
tccttccccggcatgctggtctgcatctacttcatcatcctctttgtctgtgggaactat
atcctcctcaatgtcttcctggccattgcagttgataatctggctgaggctgagagcctg
acctcagctcagaaggccaaagctgaggaacgcaagcggcggaagatgtccagaggttac
ccagaaaagtctgaagatgaaaaacagatgttggcaaagaagcttgagcagaaggcgaag
ggagaagggattcccacaacagccaagttgaaagtggatgaatttgaatccaatgtcaat
gaaatcaaagatccctacccctccgcagacttcccaggtgatgatgaggaggatgagcct
gaaatccccctgagtcctcggccgcgtcctctggcagagctccagctgaaagagaaggct
gtgcctatgcctgaagccagctccttcttcatcttcagcccaacaaataagtttcggatg
ctgtgccacagaatcgtcaacgccacttggttcaccaacttcatcctgctcttcatcttg
ctcagcagcatctccctggcagctgaggatcccatccgagccgagtcgttccgcaaccag
attcttggatactttgacatcggtttcacttctgtcttcactgttgaaattgtcttgaag
atgacagcatacggtgctttcctgcacaaaggctccttctgcaggaactcattcaacatc
cttgacttgctggtggttgctgtgtcccttgtctccatgggattcgagtccagcaccatc
tcagtggtgaagatcctccgggtgctgagggtgctgaggcctctgcgagccattaacaga
gcgaagggtctgaagcacgtggtccagtgcgtgttcgtggccatcaaaaccattggtaac
attgtggtcgtcacgacgttgctgcagttcatgtttgcctgcatcggggtgcagctcttc
aagggcaagttttacagctgcacagatccctccaagctaacagagaaggagtgcaggggg
catttcatcaactacgtggatggggacccaacacagatcgagctgaaggagcgggtctgg
ttccacaatgcctttcacttcaacaatgtcttctcagccatgatgtcgcttttcactgtc
tccaccttcgagggctggccagagctgctgtacagggccattgacactaatgatgagaac
aaaggccctatatacaactaccgggtggagatcgcaatgttcttcatcatctacatcatc
ctcattgccttcttcatgatgaacatctttgtgggctttgtcattgtcaccttccaggag
cagggggagagcgagtacaagaactgcgagctggacaagaaccagcgccagtgtgtgcag
tacgctctgaaggctcgcccgctgcggcggtacatccccaagaacccctaccaataccag
atctggtacgtggtcacctcctcctactttgagtacctcatgttcttcctgatcatgctg
aacaccatctgcctgggcatgcagcattacaaccagtctgcagaaatgaaccacgtctca
gacatcctcaatgtggcctttactgtcctcttcaccctggagatgatgctcaagctcatg
gcctttaaagccaagggctactttggggacccctggaatgtcttcgacttcctcatagtg
attggcagcatcatcgatgtcatcctcagcgagattgatactgttcttgcatccagtggt
ggattgtactgccttggcggaggctgtgataacattgacccggatgacaactcccgtgtc
tccatcactttcttccggctgttccgggtgatgcggctggtgaagctgctgagccgggga
gaaggtgtcaggaccctgctgtggaccttcatcaaatccttccaggctctgccctatgtt
gccctgctgatcgtgatgctattcttcatctatgctgtgattgggatgcagatgtttggg
aagattgccatggtggatggaacccagatcaaccgaaacaacaacttccaaaccttccca
caagctgtgctgctgctcttcaggtgtgccacgggggaggcctggcaggagatcctgctg
gactgcagctacggaaagcggtgcgaccctgagtccgactacgcggagggcgaggagtac
acctgtggcacgggctttgcctacttctatttcatcagcttctacatgctctgtgccttc
ctgatcattaatctctttgtggccgtcatcatggacaactttgactacctcacacgtgac
tggtccatcctgggcccccaccacctggacgagttcaaacggatctgggccgagtacgac
cccgaagccaagggcaggatcaagcacttggacgtggtgaccctgctgagacgtatccaa
cctcccctgggctttgggaagttctgccctcaccgtgtagcttgtaagcgcctggtgtgc
atgaacatgcccctgaacagcgatggcactgtcaccttcaatgcaacactgtttgcgctg
gtgaggacagccctcaagatcaagacagaaggtaattttgaacaggccaatgaggagctc
agaaccattatcaaaaaaatctggaagcgaaccagtatgaagcttttggaccaggtcatc
ccacctattggagatgatgaggtgacagtgggcaaattctatgctactttcctcatccaa
gagcatttcaggaagttcatgaagcgccaggaggagtactatgggtaccgtcccaagaag
aaccctgtagagatccaggctgggctgaggagcattgaagaagaagccgctcctgaaatt
catcgagccatctctggggacctgactgctgaggaagagctggagagggcaatggtggaa
gctgccatggaggaggggatctacaggaggacgggcggtttgttcggccaggtggacagc
ttcctggagccaagcagccccctgcagccccacatggccagccagaggcccctgcagttt
acagaggtgggcagcgaagacctcgactcccccgtcttcctcgacgacttcccccaggaa
ggcaacaccaacgtcaacaacgccaactggctgcaggggttggagtacgaggatgaggtg
ctgaggagagcagtgctggcagcacccaggcctccagcgcgggagactgacctccccatc
cctttggaaaggctgcggcggagacgaggagctgcctctgagcatcacccagcatcgggg
cagtgcctccatccccagcagggcagcacagtgacagcagcagcatccagctcagaacac
cggtggcatgaaagcactgacacaaacacatcttccacccctgccatcaccttcctcatt
caagaggctctgatctccggaggcctcgcagctctggcccgtgatccatccttcgttgca
gtgaccagggatgagatggcagccagcagtcagctggaggtggatgaagtggagaaagca
gcagtggagctgctaaagggaagagaagcactgtgggacacagaaagcagctctgccccc
cgggacaccttggctgcatcagaagtcagcgccccagggctcagtgtggccacatcccat
cagaccagctctgctgctcgcctgtga
DBGET
integrated database retrieval system