Tympanuchus pallidicinctus (lesser prairie-chicken): 128090353
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Entry
128090353 CDS
T08967
Symbol
HCN2
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpai04040
]
128090353 (HCN2)
Ion channels [BR:
tpai04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
128090353 (HCN2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
128090353
NCBI-ProteinID:
XP_052558579
LinkDB
All DBs
Position
Unknown
AA seq
904 aa
AA seq
DB search
MRSGGEAAAEEEAAEGAKRSGGAAAGRARSRGGKGSPNGECRRGETPRSPSAEQPREPKV
SFSCGGGGVGGGASPGGAKAAEEGDDAGEETRGSQASFMQRQFGAMLQPGVNKFSLRMFG
SQKAVEREQERVKSAGAWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITFFKEETTAPW
IVFNVVSDTFFLMDLVLNFRTGIVIEDNTEIILDPERIKKKYLKTWFVVDFVSSIPVDYV
FLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAV
MRIINLIGMMLLLCHWDGCLQFLVPMLQDFPQNCWVSINGMVNDSWSELYSFALFKSMSH
MLCIGYGKQAPESMTDIWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVE
QYMSFHKLPADFRQKIHDYYEHRYQGKMFDEDSILGELNEPLREEIVNFNCRKLVASMPL
FANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSILTKGNKEMKLSDG
SYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIG
KKNSILLHKVQHDLNSGVFNNQENEIIQEIVKYDREMVQQAELQQHTAMYSPVQPQVTSA
IATLQQAVAMSFCPQMASPLVGSMALGSPRMMRRLQYAQAVPSPFAVSPVLLQQSPPQQQ
PQPPVPHANPSPSQDQAQPASASAFAVTSPPSQSPLASRTFAYGGAKGQLGSQLSLSQQQ
TPGSPPRLAVHKSTQALPTSSFSQDSRPLSASQPSLPHGLAAGGTQSPPASVHESSASIG
GGPAATAVSPGSGPPAGLRGAVSSRGPLSHPAPTLQQDSAAARKDSVGSMPDTDPAKSRL
SSNL
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcgggcggggaggcggcggccgaggaggaggcggccgaaggggccaaacgaagc
ggaggggcggccgcggggagggcgcggagccgcggtgggaagggatccccgaacggagag
tgccgccgtggggaaacgccgcgcagccccagcgcggagcagccccgagagcccaaggtc
tctttctcctgcggcggcggcggcgtcggcggcggtgcatccccaggcggggccaaagcg
gccgaggaaggcgacgatgcgggcgaggagacccgcgggagccaggccagcttcatgcag
aggcagttcggtgccatgctccagcccggcgtcaacaagttctcgctgcggatgttcggt
tcgcagaaggcggtggaacgggagcaggaacgcgtcaagtcagcgggggcctggatcatc
catccctacagcgatttcaggttttactgggacttcacgatgctgctcttcatggtgggc
aacctgatcatcattcccgtgggcatcaccttcttcaaggaagaaaccacagccccctgg
atcgtgttcaacgtggtctccgacaccttcttcctgatggacctggtgctgaacttccgc
acggggatcgtcatcgaggacaacacggagatcatcctggaccctgaaaggatcaagaag
aagtacctcaagacgtggtttgtggtggactttgtctcctccatccccgtggactacgtc
ttcctcattgtggaaaagggcatcgactcggaggtctataagacagcccgcgctcttcgc
atcgtccgcttcaccaagatcctcagcctgctgcgcctgctgcgcctctcccgcctcatc
cgttacatccatcagtgggaggagatcttccacatgacctacgacctggccagtgctgtg
atgaggatcattaacctcattggcatgatgctgctgctgtgccactgggacggctgcctc
cagttcctcgtgcccatgctgcaggatttcccccagaactgctgggtctccatcaacggg
atggtgaacgactcctggagcgagctgtactccttcgccctcttcaagtccatgagccac
atgctgtgcatcggctacggcaagcaggcacccgagagcatgacggacatctggctgacg
atgctgagcatgatcgtgggagccacctgctatgccatgttcatcggccacgccaccgcc
ctcatccagtcgttggactcctcccgacgccagtaccaggagaagtacaagcaggtggag
cagtacatgtccttccacaagctgcccgctgatttccgacagaagatccacgattactac
gagcaccgctaccagggcaagatgtttgatgaggacagcatcctaggggagctcaatgag
cccttgcgtgaggaaatcgtgaacttcaactgccgcaaactggtggcctccatgccgctg
tttgccaacgcggatcccaactttgtgacggcgatgctcaccaagctcaagtttgaggtg
ttccaaccaggagattacatcatccgcgagggaaccattggcaagaagatgtacttcatc
cagcacggcgtggtcagcatcctcaccaagggcaacaaggagatgaagctctctgatggc
tcctactttggggaaatctgcctgctgacccgtggtcgacgcacagccagcgtccgggcg
gacacctactgccgcctctactcactgtcagtggacaacttcaatgaggtgctggaggaa
taccccatgatgcggagagccttcgagaccgtggccatcgaccgcctcgatcgcatcggg
aaaaagaactcgatccttcttcacaaagtgcagcacgacctcaactcgggcgtcttcaac
aaccaggagaacgaaatcatccaggagattgtcaagtatgaccgagagatggtgcagcag
gcggagctgcagcagcacacggccatgtacagcccggtgcagccccaggtcacctccgcc
attgccaccctgcagcaagccgtcgccatgagcttctgcccacagatggccagccctctg
gtgggctccatggcgctgggctcgccccgcatgatgcgtcgcttgcaatacgcccaggcc
gtgcccagccccttcgccgtctccccggtgctgctgcagcagagccccccccagcagcag
ccgcagccccccgtgccccacgccaacccgtcgccctcgcaggaccaggcacagcccgcc
tccgccagcgccttcgcagtcaccagcccgccgtcccaaagccccttggccagccggacg
tttgcctacggaggggccaaagggcagctgggctcccagctctcgttgagccagcagcag
acgcccggttcgcccccacggttggcagttcacaaaagcacacaggcgctgcccaccagc
agcttcagccaggattcacggcctctatcggcttcgcagccctccctgccccacgggctg
gcggctggcggcacccagagccccccggcttcagtgcacgaatcctctgcttccatcggt
ggaggcccagctgccaccgccgtttcgccgggctcgggtcccccagccgggctgcgaggt
gcggtgtcctccagggggcccctgtctcaccctgcacccactctgcagcaggactcggcg
gcagcccgcaaggattcggtgggcagcatgcccgacacggacccagccaaatccaggctg
tcttccaacttgtga
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