Tympanuchus pallidicinctus (lesser prairie-chicken): 128090380
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Entry
128090380 CDS
T08967
Symbol
MED16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpai03021
]
128090380 (MED16)
Transcription machinery [BR:
tpai03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
128090380 (MED16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_IFT122_1st
DSE1_N
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_HPS5
CDC45
Motif
Other DBs
NCBI-GeneID:
128090380
NCBI-ProteinID:
XP_052558632
LinkDB
All DBs
Position
Unknown
AA seq
860 aa
AA seq
DB search
MRGAAPGGILSTPLPLPQTTGSLLIASGAAMDLAYVCEWEKRPKSDHCPSIPLVCAWSCR
NLIAFTTDLRNEEERDLTHMVHIIDTEHPWDVHSVNSGHVEAITCLEWDQSGSRLLSADA
DGHIKCWSMTDHLANSWENTVGSMVEGDPVVALSWLHNGVKLALHVEKSGASNFGEKFSR
VKFSPSLTLFGGKPMEGWIAVTISGLVTVSLLKPNGQVLTSTESLCRLRCRVALADVAFT
GGGNIVVATSDGSSASPIQFYKVCVSVVNEKCKIDTEILPSLFMRCTTDPARKDKYPAIT
HLKFLARDMSEQVLLCASNQNNSIVECWSLRKEGLPVNNIFQQISPVVGDKQPMILKWRI
LSATNDLDRVSAVALPKLPISLTNTDLKVANDTKFFPGLGLALAFHDGSVHIVHRLSLQM
MAVFHGSSSQRPVDEQTIKRQRTTGPLVHFKAMQLSWTSLALAGIDSHGKLSMLRISPSM
GHVLDMNTSLRHLLFLLEYCMVTGYDWWDILLHVQPNMVQNLVEKLHEEYTRQSAALQQV
LATRIVAMKASLCKLSSSTIARVCDYHAKLFLIAISCTLKSLLRPHFLNTPDKSPGDRLT
EICSKITDIDIDKVMINLKTEEFVLEMNTLQSLQQLIQWVGDFVLYLLASLPNQGSPVRP
GHSFLRDGPSLGMFRELMVVIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKLWLCCR
EENHITEPDDTLIDECCLLPSQLLIPNIDWLPINDGIISKLQNKQLVRLQFGKAPGLIGH
TVSSQFDAFVRAPGQPKIDHLRRLHLGAFPTEECKSCTRCGCVTMLKSPNKVTAVKQWEQ
RWVKNCLCGGLWRRMPLSYS
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggtgccgctccaggtggcatcctttccacccccctcccccttccccaaactacc
gggtcgctccttatcgcttcgggagcagcgatggatttggcgtacgtgtgcgaatgggag
aagcggccgaagagcgaccactgcccgtccatccctttggtgtgcgcctggtcctgccgc
aacctcatcgcctttaccaccgacctgaggaacgaggaggagcgcgatctcacccacatg
gttcacatcatcgacacggagcatccctgggacgtccattccgtcaactccggccacgtg
gaagccatcacctgcttggaatgggatcagtcgggctccaggctgctctcagcggatgca
gacggccacatcaagtgctggagcatgaccgaccacctggccaacagctgggagaacacc
gtgggcagcatggtggagggagatcccgtggtggccctatcctggctgcacaatggtgta
aagctggcactgcatgtggagaagtcgggagcatccaacttcggggagaagttttccagg
gtcaaattctctccgtcgctgacgttgtttggtgggaagcctatggagggctggattgct
gtgaccatcagtgggctggtgactgtctccctcctcaagcccaacgggcaggtgctgaca
tccacagaaagcctttgccgcctccgttgccgcgttgccttggcggatgtcgccttcact
ggtggggggaacatcgtggtggccacttcagatggcagcagtgcctcccccatccagttc
tacaaagtctgtgtgagcgtggtgaatgagaaatgcaagatagacactgaaatcctgcct
tccctcttcatgcgctgcaccaccgaccctgcccgcaaggacaagtacccagcaatcact
cacctgaaattccttgctcgggatatgtcagaacaggtgttgctttgtgcttccaaccag
aacaacagcattgtggagtgctggtctctgcggaaagagggcttgcctgtcaacaacatc
ttccagcagatctctcctgtggttggagacaaacaacccatgatcctgaaatggcgaatt
ctttctgccaccaatgatctggatcgtgtctcagctgtggctctgcccaagttgcccatc
tccctcacaaacactgatctgaaggtggcaaacgacaccaaattcttccctggactgggt
ctggccttggcttttcacgatggcagcgtccacatcgttcatcgcctgtccctgcaaatg
atggctgtcttccatggctcttcttcccagcgcccagtggatgagcagacgatcaaaagg
cagaggactaccggccccctggttcacttcaaagccatgcagctctcctggacgtctctg
gccttggctggcattgatagccacgggaagctgagcatgcttcgtatctccccctccatg
ggccacgtgctggacatgaacacctccctccgccacttgctgttcctgttggagtactgc
atggtgactggctacgactggtgggacatcctgctccacgtccagcccaacatggtccaa
aacctggtggagaagctgcatgaagaatacacacggcagagtgcagccctgcagcaggtt
ctcgccacacgcatagttgccatgaaagcatctctttgcaagctctcctccagcacgatt
gcccgtgtttgtgactaccatgccaagctgttcctgattgccatcagctgcaccctgaag
tcgctgctgcgcccacacttcctcaacaccccagataagagtcctggggaccggctcaca
gagatctgctccaagatcacagatatagacattgacaaggtgatgatcaacttaaagaca
gaggagtttgtcctggagatgaacacactgcaatctctgcagcaactcatccagtgggtg
ggggattttgtgctctatctactggccagcctgcctaaccagggctctcctgtgaggcca
ggccacagcttcctgcgagatgggccatccctgggcatgttcagggagctgatggtggtg
attcgcatatgggggctgctgaaaccaagctgcctccccgtctacacagcaacctctgac
actcaggacagcatgtccctcctcttcaggcttctaactaaactctggctgtgctgtcgt
gaggaaaatcacatcacagagccagatgataccctgatagatgagtgctgcctcctgccc
agccagttgctcattcccaatatcgattggttgcctatcaacgatggcattatcagcaag
ctgcaaaacaaacagcttgtcaggctgcagtttggaaaagctcctgggctcatcggtcac
actgtctcttcccagtttgatgcctttgtaagggctcctggtcagcccaaaatcgatcat
ctgagaaggcttcatttaggagcgttcccaacagaggaatgcaagtcgtgcaccaggtgt
ggctgcgtcacgatgctgaaatctccaaacaaagtcactgctgtgaagcagtgggagcaa
cgctgggtcaaaaactgcctgtgtggggggctgtggaggaggatgcccctcagctattcc
tga
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