Tympanuchus pallidicinctus (lesser prairie-chicken): 128090429
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Entry
128090429 CDS
T08967
Symbol
CHAF1A
Name
(RefSeq) chromatin assembly factor 1 subunit A isoform X1
KO
K10750
chromatin assembly factor 1 subunit A
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpai03036
]
128090429 (CHAF1A)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
128090429 (CHAF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1-p150_C2
CAF1A_acidic
CAF1-p150_N
CAF1A_dimeriz
Motif
Other DBs
NCBI-GeneID:
128090429
NCBI-ProteinID:
XP_052558710
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MYWAAPPLCPPLLKDCLDLHRAAPPSLPPDSNTASGPGVRDLPRSSFLVIFIQSALPASE
SDNPDRQSALLLALTNADVGAEPAPSLPHRLLARRGRRQGGRKSESRGRSRPISAGRRGV
VPAPAKYEREAQGRNRTERVGAGRVRSGLLPLEPWRLAMAAMECRDKAVVPPRRLVQARL
PFKRLNPVPKEKCDAEAEGKKGKSSKSGLGQSKDSSTATSCASTDNMENDCQLNSDVTFV
PKLVNGKGPLDHFIQKGSKDNRDEIIVIIDSVDEPNQRLSDDVDHVNFDSKASSAALTNG
VLGKDTNKLSCLNSTQNSQTDDSMETDVQCEAIANKGEDLVDGIQSCSGLTKCNNLENTK
VNQGELKDVIFEGKMPVVLLEDIMAAKSPQVTSLDGSVTSENETVELSHEGDSVLTNSSL
SSLSVSSPEAQPVAESKRNTSPLAVSTPIRKVSQKLHKSSAEKEKLRLQRDQERADKLQK
LQAEREEKGRLKEEAKAAKERAKEEAKKKKEEEKELKEKERREKKEKEEKEKAEKLRVKE
EKRKERQEALEAKLEEKRKKEEEKRLKEEEKRINAQKAEITRFFQKPKTPQAPKILAGSC
GKFAPFEIKENMVLAPLCRIALYPDFLEQLDRLLRAQNSEVSFLRDLKCRKPRKTGPTFV
NSSTTVNSDVVVVDNCKTDAVPERGKFGRMKLLQFCENHRPAYWGTWNKKTTVIRPRNPW
SKDSKLLDYEVDSDEEWEEEEPGESLSHSEGDDEEEGEDEDDDDGFFVPHGYLSEDEGVT
EECDPENQKVRQKLKAKEWDELMAKGKRLHVLQPVKIGCIWESAQNDSGTNADLKVLQQF
TACILDSSLAEEEQQIQKCSKKRAKDQQILGQLLPLLHGNVNGSKVIIQEFQECCRQGLF
SDVTAAESGDTSPVSPNASRPQTPVGEDSGVPSKARLKRIISENSVYEKRPEYRMCWYVH
SEVLKSFDQEHLPVPCQWNYVTQVPSSGKEDGGGVPGVAPVQSTPVSVKRKSTGSMCITK
FMKRPRGAEQAEAMEMDGFQADTEEDEDDDDCMIVDVQPCKDSTLTVTETAPESSGTAAA
HQDANVVSPSNTV
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgtactgggcggccccgcccctctgcccaccactgctgaaggactgccttgatctccac
agagccgcaccgccctcactcccgccggacagcaacacggcctcaggcccgggggtgagg
gaccttccgcgctcctcctttctcgtcatcttcatccaatcagcgcttccagcgagcgag
agtgacaatcctgaccgccaatcagctctccttctcgctctgaccaatgcggatgtaggg
gcggagccggcgccgagcctcccgcacaggctcctcgcgagacgcgggcggaggcagggc
gggcggaagagcgagtcacgtgggcgctctcggccaatcagcgcgggcaggcgcggggtc
gtcccggctcccgccaaatacgagcgggaggcacagggccggaaccggacggaacgggtt
ggagcgggccgggtccgctctggtctgctgccgctggagccgtggcgcctcgccatggca
gccatggagtgcagagacaaagcggtcgttcccccgcggagactcgtgcaagctcggttg
cctttcaagcgcctgaatcctgtaccaaaggagaaatgtgatgcagaagcagaaggcaag
aaaggaaagagttctaagagtggtttgggccaaagtaaggattcttccacagccacatcg
tgtgcttccacggacaatatggagaatgactgccagctgaattcagatgtgacttttgtt
ccgaaacttgttaacgggaagggtcctttagaccactttatacaaaagggctcaaaagat
aacagagatgaaatcatcgtcattattgactctgtagatgagcctaatcaaaggctcagt
gatgatgtagaccacgttaattttgattcaaaagcatcttctgcagctctgactaatggt
gtgctaggaaaagatacgaacaagctgagttgcctgaattccacccagaacagccaaact
gatgattcaatggagactgatgtgcagtgtgaagctattgcaaataagggtgaagatttg
gtagatggaatccagtcttgttctgggttgacaaagtgtaacaacttggaaaacacgaag
gttaatcagggtgaactgaaggacgtcatatttgaggggaagatgcctgtagtgcttctt
gaagatattatggctgctaaatctccccaagtcacttctctggatggaagtgtcacatca
gaaaatgagaccgtagaattgtcccatgaaggagactctgtacttactaattcctcatta
agctccctctctgtgagctcccctgaggcacagcctgttgcagaaagcaagagaaatact
agtcctttagctgtctcaacgcctattaggaaggtatctcagaaactccacaaaagttct
gcagagaaggagaagctgagattgcaaagagatcaggagcgtgctgacaagctgcagaag
ttacaagcagaaagggaggaaaaaggaaggctgaaagaagaggcaaaagctgcaaaggag
cgagccaaggaagaggcaaagaagaagaaagaggaagagaaagaactgaaagagaaagag
agaagagaaaagaaagaaaaagaagaaaaggaaaaagctgagaagttgagagtgaaggag
gagaaacgcaaggagaggcaggaagccttggaggcaaaacttgaggagaagagaaagaaa
gaagaggagaaacggttaaaagaggaggaaaagcgtattaatgctcagaaagcagaaatt
acaagattcttccagaaaccaaagactccgcaagccccaaagattcttgctggctcttgt
gggaagtttgctccttttgaaattaaagagaacatggtcttagctcccctctgtcgtatt
gccctttatccagacttcttagaacagctggatcggctcctgcgcgcacagaatagtgaa
gtttctttcttgagagacctcaagtgtcgtaagccacgtaaaactggacccacttttgtc
aatagcagtaccacagtgaacagtgatgtggtagtggtggataactgcaaaacagatgct
gttcctgaaagggggaaatttggtagaatgaaacttctgcagttctgtgaaaatcaccgt
cctgcatactggggcacatggaacaagaaaaccactgtcatccgtcccaggaatccttgg
tcaaaggacagtaaattactggactatgaagtagacagtgatgaagagtgggaagaggag
gaacctggtgaaagcctttcccatagtgaaggggatgatgaagaggaaggagaggatgaa
gacgatgacgatgggttttttgtaccccatgggtacctatctgaagatgaaggagtgaca
gaagagtgtgatccagagaatcagaaggttcgtcaaaagctgaaagcgaaggagtgggat
gaactgatggccaaggggaagaggctccatgttctacagcctgtgaaaattggctgcatc
tgggaaagtgcacagaatgacagtggcacaaatgcagacctgaaggtcctccagcagttc
acagcgtgtatcctggattcatctcttgctgaggaagaacagcagatacagaaatgtagc
aaaaaaagagcaaaagatcagcagatccttggccagcttctaccactgctccatgggaac
gtgaacgggagcaaagtgatcatccaggagttccaggagtgctgcaggcaaggactgttc
agtgatgtgactgcagctgagagtggagacacgagccctgtgagccccaacgcctcccga
ccgcagacaccagtcggtgaggacagcggtgtcccttccaaagccaggctaaagagaatc
atttctgagaactctgtgtatgagaagagacctgaatatcggatgtgttggtacgtccac
tcggaggtgctgaagagtttcgatcaagagcacctccctgtcccttgccaatggaactac
gtcacccaggtcccttcttcaggaaaggaggacggtggtggggtgccaggtgtggcacct
gtgcagagcacccctgtgtcagtaaagaggaagtccactggaagtatgtgcatcactaaa
ttcatgaagaggcctaggggtgctgaacaggctgaagccatggagatggatggctttcag
gcagacactgaggaagatgaggacgacgacgactgcatgattgtggatgtacagccatgc
aaagattcaacactgacagtcactgaaacagctccagaatccagtggtacagctgctgct
caccaggatgccaatgtggtcagcccatctaatacagtttga
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