Tympanuchus pallidicinctus (lesser prairie-chicken): 128090434
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Entry
128090434 CDS
T08967
Symbol
HDGFL2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2 isoform X1
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpai03400
]
128090434 (HDGFL2)
DNA repair and recombination proteins [BR:
tpai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
128090434 (HDGFL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
128090434
NCBI-ProteinID:
XP_052558739
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MPHSFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP
YEKYKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPPPASSSDSDIPENDPMGGSDAGDDE
EDAAMAAVTTEKMESDEDSDRGSDHSGLKRKSLAMKYQMPVAKRPWKSSSEDQGSPSLTE
EENSETSSESEKNSDQDFTPEKKPVARAPRRMPAGGRKKKKVESCSDSDSKVDSDSEMGN
ATVDMTKSDSNSDSDSDVSVKKPQRGRKPAEKPPPKPRGRKPKLERVPISSSSDSDSDSD
VDRISEWKRRDEERRRELEEKRKREQEEEIRRLREQEKEEKEKRKEKAEKGEEVHSDSDS
SADDEVAKKGRKGRGKAPSSSDSELEMEKEVKKPVKKQPSELSRKPNQKEKRGRAEEKPR
NKPLKVERGRKKSDLIPERRMEKKKEPTVEEKLQKLHSEIKFALKVDNPDIKRCLNALEE
LGALQVTSHILQKHTDVVATLKKIRRYKANKDVMEKAAEVYTRLKSRVLGPKMEAIQKAN
KAGPEKDKGDVEKGQEKLSGGEAQNEKGEEEMNADLSGPVNGESLSQKMEGTEEQERDKS
RGPGAGEPEAPSEEAHNNVQDYPSTERERARGESESVDDAEES
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacagcttcaagcccggagatctcgtcttcgccaagatgaagggctacccgcat
tggcccgcccggatcgatgacatcgcggatggtgctgtgaaacccccgccgaacaagtac
cccatcttcttcttcggcactcacgagaccgcctttttgggccccaaagatctgttcccc
tatgaaaagtataaggacaaatatgggaaaccaaacaagagaaaaggcttcaacgaggga
ttatgggaaatccagaacaaccctcatgccagttacagtgcccctccgcctgccagctcc
tctgacagtgacatccccgagaatgacccgatggggggaagtgatgctggtgatgatgag
gaagatgctgccatggctgcagtcaccacagagaaaatggaaagtgatgaggactcagat
cgaggcagcgaccacagcgggctcaaacgaaaatcactggcaatgaaatatcagatgcca
gtggcaaaaaggccttggaaatcttcaagtgaagatcagggcagcccttccctgacagaa
gaagagaactcagaaacgtcgtctgagtcagaaaaaaacagtgaccaggatttcactcct
gagaagaagccggtggccagggctccccggaggatgcctgcagggggaaggaagaagaag
aaagtggagtcttgctccgactctgactccaaagtggactcagactcagaaatgggaaat
gcaactgtggacatgaccaagtcagactccaactccgattcagactctgatgtgtctgtt
aaaaagcctcaacggggcagaaagccagctgagaaaccccctcccaagccccgtggcagg
aaaccaaaactcgagcgtgtccctatcagctccagcagcgacagtgatagtgacagtgat
gtggatcgtatcagtgaatggaagaggagagatgaggaaaggcgacgggagctggaagag
aagaggaagagggaacaagaggaagaaatccgtcggctccgggagcaggagaaggaagag
aaagaaaaaaggaaggagaaggcagagaagggcgaggaggtgcactcagacagtgacagt
agtgcagatgatgaagtggccaaaaagggcagaaagggccggggtaaggccccgtcctcc
tcggactctgagctggagatggagaaagaggtaaagaaaccagtgaagaagcagccctca
gagttgtcaaggaaaccaaatcagaaggagaagagaggccgagcagaggagaaaccacga
aacaaacctttgaaagtggaaagaggccggaagaagtctgacctgatccctgaaaggaga
atggagaagaaaaaggagcccacagttgaagagaaacttcagaaacttcacagtgagatc
aagtttgccttgaaggtggacaacccagacatcaagcggtgcctgaatgcgttagaggag
ctgggtgcactccaggtcacctctcacatcctccagaaacacactgatgtggtggctact
ctaaagaagatccgtcgctataaagcaaacaaggacgtgatggagaaagctgctgaagtc
tacacccgcttgaagtcgcgtgtcttaggaccaaagatggaagcaatccagaaagccaac
aaagctgggcctgagaaggacaagggggatgtggagaaaggccaggagaagctgtcggga
ggggaggcacagaatgagaagggagaagaggaaatgaatgctgacttgtcaggtcctgtg
aatggcgaatccttgtcccaaaaaatggagggcacagaggagcaggagagagacaaaagc
cgagggccaggagctggagagccggaggcacctagcgaggaggcccataacaacgtgcag
gattatcctagcaccgaacgggagagggctcgtggggagtcagagtctgtggatgatgca
gaggagagctga
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