Tympanuchus pallidicinctus (lesser prairie-chicken): 128090441
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Entry
128090441 CDS
T08967
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpai03000
]
128090441
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tpai03310
]
128090441
Transcription factors [BR:
tpai03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128090441
Nuclear receptors [BR:
tpai03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
128090441
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Acetyltransf_10
Motif
Other DBs
NCBI-GeneID:
128090441
NCBI-ProteinID:
XP_052558757
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All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRQEQSGGPKDEPEPLSRI
YTTSVSSGLSDLDDISTLSDGLLFDFPLTPDGSSTYYNLDLLASAQPSPDQSSLDVADAT
LIKQESIYELMLEPALFAHGALEGSQLAGDISVLEIDRIAQNVVKSHLETCQYTAEELKH
LAWSLYSPEEVRALQSKSCEAMWQQCSLHISNAIQYVVEFAKRIDGFMELCQNDQIILLK
AGCLEVLLLRMIRAFNPLNNTVLFEGKFGGVQMFKALGCDDLISAVFELGRTLCRLQLSD
EELALFTAAVLLSPDRPWLTESKKVQKLQDKIYVALQHEIQKKHSAEDKLSKMVSKLPLM
KTICNLHLDKLEFFRLLHPETAMNFPPLYKEVFNSELQYSDPRES
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaatcgaggtgatcccctgcaagatctgcggggacaaatcctcggggatc
cactacggcgtcatcacctgcgagggctgcaagggttttttccggcggagccagcagaac
aacgccagctattcctgctcacggcagaggaactgcctgatcgaccgcaccaaccgcaac
cgctgccagcactgccgcctgcagaaatgcttggcgctgggcatgtcccgtgatgcggtg
aagtttggccgcatgtccaagaagcagcgggacagcctctacgccgaggtacagaagcac
cagcagagacaggagcagagcggtggccccaaggatgagcccgaacccctgagccgcatc
tacaccaccagcgtcagcagtggcctctcagacctggatgacatctccacgctgtctgac
gggctcctcttcgacttccccctcactcctgatggcagcagcacctactacaacctcgac
ctgctggcctcggcgcagccctcgcctgatcagtccagcctggatgtggccgacgccacg
ctcatcaaacaggagtccatctatgagctgatgctggagccagccctgtttgcgcatggg
gcgctggagggcagccagctggctggggacatctccgtccttgagatcgaccggatcgcc
caaaacgtggtcaagtcgcacctggagacctgtcagtacacagcagaggagctgaagcac
ctggcctggagcctctactccccagaggaggtccgtgccctgcagagcaagagctgtgag
gccatgtggcagcagtgctcgctgcacatctccaatgccatccagtacgtggtggagttc
gccaagcgcatcgatggcttcatggagctctgccagaacgaccagatcatcctcctcaaa
gccggttgcctcgaggttctcctgctccgtatgatccgagccttcaaccccctgaacaac
accgtgctcttcgaggggaagtttggtggcgtgcagatgttcaaggcgctcggatgcgac
gacctcatcagcgctgtcttcgagctgggaaggaccctgtgccgcctgcagctgtcagat
gaggagctcgccctgttcactgccgctgtgctgctctccccggaccgcccgtggctgacg
gagtccaagaaggtgcagaagctccaggacaagatttacgtggccctacagcacgagatc
cagaagaaacactccgctgaggacaagctctcaaagatggtctccaagctgcccctgatg
aagaccatttgcaacctgcacttggacaaactggaatttttccgtctcctgcacccggag
acggccatgaacttcccacccctctataaggaggtcttcaactcggagctgcagtacagc
gacccacgggagagctaa
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