Tympanuchus pallidicinctus (lesser prairie-chicken): 128090471
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Entry
128090471 CDS
T08967
Symbol
GLI1
Name
(RefSeq) zinc finger protein GLI1
KO
K16797
zinc finger protein GLI1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128090471 (GLI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpai03000
]
128090471 (GLI1)
Transcription factors [BR:
tpai03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
128090471 (GLI1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
zf_C2H2_17_2
zf_C2H2-Disco
DUF7565
Motif
Other DBs
NCBI-GeneID:
128090471
NCBI-ProteinID:
XP_052558796
LinkDB
All DBs
Position
Unknown
AA seq
1282 aa
AA seq
DB search
MFNPVTPQGPGYAEHCCPRPLHGASAGTAALQGLDFSVCHPPSLASSHHGYGLVPGTEHP
GGADGSRFSTPRGAGKLGKKRALSISPLSDSSVDLQTVIRTSPNSLVAFINSRCASASGS
YGHLSISSISPSLGYQNPPGQQKSQGQLFSHTPPLPPCSSHETLSSRPGLLHHTPARGPL
KHCQQLKLERSLSSPLTAKYAEEKSEGDISSPASAGTQDPLLGMLSVREDLEKEDGKPEF
ETIYETNCYWDGCAKEFDTQEQLVHHINNEHIHGEKKEFVCHWAACSREQRPFKAQYMLV
VHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRA
KHQNRTHSNEKPYICKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKHRGSAVPGHTLPA
SGAPQDTKQEKNTNGPAEIRKDDSKLLVPDFASKPQPSPGGQSSCSSDRSPLGSTTNNDS
GVEMTGNTGGSYEDLSTLEEVVPGEPMGTSGLMALQKLENLRIDKLKQMRKPSATKGLNL
PAIPGAGPPGDGPGLCVPPAASQRRIADLSAAELAVPPSERRSSATSTVSSAYTVSRRSS
AASPYLMGPNPAGEAGTMPGCSDGYERLSPDEPRRSGSANPCGALPGVGGLSPAQRYRLR
AKYAAATGGPPPTPLPSVEPLPTGGHGGVPGDCLEPAVPPFFTNGLLRRHSSNERYVSSL
HPHLVPGNGARRASDPARTAADPQCHAVPKVQRFKSAGNVSAPGGSRAALQPLPASDAAL
QLRGFSPRPPSISENVYLESVNAEGPAPGAESGLLEMDPFLNYPEESFPCQGANVQLQCG
GLYGSAPRTPGGGMQLNPCGHGEMEEGLLQPEFSLPQCQMNQHFPGLRAGSGAVLPQWEE
PQPSGHLELSSGQPGLGAVAETHCHRHAAPYPAPSHCVQHPRLMSACQDGGFSDGHRLNC
LQIKSEQRYSAPAPALAPCQNAKAAQQPTFGQTVSGYRAEEQTASSYAAVLSSRGRRAHT
PTLQAKEVMVRSYVQAQQALMWGEPPGAGEAGMGLGGESGQYQGTRAPPYLGPKYSGYQP
KANHLQGLLENPHLLSPPCFNPEMAPHPPSGAKPPGHQNSVGYGGNLAEPNPSYEAAGAN
PQRGLRLPPVHPAPEVPGDALLCYPGQVGKGSHKLQGPPAASCGGPGHCTGSLGGNKGSS
CFYPDSGQQAFNSLDSLDLENTHLDFAAIVEDAESSTLLPGPPSPTGGLLLPAPGGANMA
VGDMSSMLSTLAGESHFLNSLS
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaccccgttacgcctcagggccccggctacgctgagcactgctgcccgcggccg
ctgcacggagcctctgcgggcacagcggcgctgcaaggactcgatttctcggtgtgccat
ccgcccagcctcgccagcagtcaccatggctatgggctggtgcccggcaccgagcatccg
ggtggtgctgatggctcgcggttctcaacgccccgtggtgccggcaagctgggcaagaag
cgggcactgtccatctcacccctgtcagactccagcgttgacctgcagacggtgatccgc
acctcgcccaactccctcgttgctttcatcaactcccgttgcgcctccgccagtggctcc
tatggtcacctctccatcagcagcatcagtccatcgttggggtaccagaaccctccgggg
cagcagaaaagccaagggcaactgttcagccacactccacccctgccaccgtgcagctcc
cacgaaaccctgtcgtcccgcccggggctcctccatcacaccccggctcgtgggcccctc
aaacactgccagcagctgaagttggagaggagcctgagtagccctctgacagccaaatac
gcagaggagaaatctgagggtgacatctccagtccagcctccgcaggcacacaggacccc
ttgctggggatgctcagcgttcgggaagatctggagaaggaggatgggaaacccgaattt
gagaccatctatgaaacgaactgctactgggatggctgtgccaaggagtttgacacgcag
gagcagctggtgcatcacatcaacaacgagcacatccacggcgagaagaaggagttcgtg
tgccactgggcagcgtgctcacgggagcagcggcccttcaaggcgcagtacatgctggtg
gtgcacatgaggcgtcacacgggcgagaagcctcacaagtgcacgtttgagggctgtaac
aaagcgtactcccgtctggagaacctcaagacacatctgcgctcccacacgggtgagaaa
ccctacgtgtgcgaacacgagggctgtaacaaagccttctccaacgcttccgaccgggcc
aagcaccaaaaccgcacccactccaatgagaagccgtacatctgcaagatcccgggctgc
accaagcgctacacggatcccagctccctgcgcaaacacgtgaagacggtgcacggcccc
gatgcccacgtcaccaagaagcaccggggcagtgcggtgcctggccacacgctgcctgcc
tccggggcaccgcaggacacgaagcaggagaaaaacaccaacggccccgctgagatccgg
aaggatgacagcaagctgctggtgcctgacttcgcctcgaagccacagcccagccctggt
gggcagtcgtcgtgcagcagtgaccgctcgcccctcggcagcaccaccaacaacgacagc
ggcgtggagatgacgggcaacacggggggcagctacgaggacctgtccacgctggaggag
gtggtgcctggggagcccatgggcacctcggggctgatggccctccagaagctcgagaac
cttcgcattgacaaactgaagcagatgaggaagccgtcggctaccaagggcctgaatctg
ccggccatccccggagccggtccgcccggagacgggcccgggctctgcgtgccgccggcc
gcatcgcagcgccgcatcgcggatctgtcggcggcagagctggccgttccaccgagcgag
cgccgcagcagcgccaccagcaccgtcagctcagcctacaccgtcagccgccgctcctcc
gccgcgtccccgtacctgatggggccaaacccggccggcgaggcggggacgatgccggga
tgctcggatggctacgagcggctctctccggatgagccgcggcgctccggcagcgccaac
ccctgcggagcgctgcccggtgtgggcggcctcagcccggcgcagcgctaccgcctcaga
gccaaatacgccgcggctacgggcgggccgcccccgaccccgctgcccagcgtggagccg
ctgcccacgggcggccacggcggcgtgcccggggattgcctcgagccggccgtgcccccc
ttctttacgaacggtttgctgcggaggcacagctccaacgagcgctacgtgagcagcctt
caccctcatctggtgcctgggaacggggcgaggagggccagcgacccggcccggaccgcc
gccgaccctcagtgccacgctgtgcccaaagtgcagcgttttaaaagcgcggggaacgtg
agcgcgccgggagggagcagagccgccctgcagcccctgcctgcttccgacgccgccctc
cagctccgaggcttctccccgcgcccccccagcatcagtgagaatgtttacctggagagc
gtgaacgccgagggccccgcacctggcgcggagtccggcttgctggaaatggacccgttc
ttgaactaccctgaggaaagcttcccgtgccagggggccaacgtgcagctgcagtgtggg
ggtctgtacggcagcgctccgcggaccccgggtgggggaatgcagctgaacccatgtggg
cacggagagatggaggagggactgctgcagcccgagttctccctgccgcagtgccagatg
aaccagcacttccccggcctgcgagctggcagcggggccgtgctgccccagtgggaggaa
ccccaaccaagcggtcatctggagctgagctctgggcagccgggactcggtgccgtggct
gagacgcactgccaccgtcacgccgctccgtacccagcgcccagccactgcgtgcagcac
ccaaggctgatgagcgcgtgccaggacggcggcttttctgatgggcaccgcttgaactgc
ctgcagatcaaatcagagcagcggtactcggcgccggccccggccctcgctccgtgccag
aatgccaaagccgcacaacagcccacgttcggccaaaccgtgagcgggtaccgggccgag
gagcagacagccagcagctacgcggctgtgctgagctcgcgggggaggagagcccacacc
cccactttgcaggccaaagaggtgatggtccgcagctacgtgcaggcgcagcaggctctg
atgtggggggagccccccggggctggcgaggccggcatggggctgggcggtgagtctggg
cagtaccagggcacgcgcgcaccgccctacctgggccccaaatactccggttaccagccc
aaagcgaatcacctgcaggggctgctggagaacccccacctcctgagccccccgtgcttt
aacccggaaatggcgccgcatccccccagcggtgccaagccaccgggacaccagaacagc
gtgggctatgggggcaacctggcagagcccaacccctcctatgaggcagcaggtgccaac
ccccagcgcgggctgcgtctgccccccgtccaccctgcccccgaggtgcccggtgacgcg
ctgctctgctacccgggccaggtgggcaaaggcagccacaagcttcagggtccgcccgct
gcaagctgtgggggtcccgggcactgcactgggagcctggggggcaacaaaggcagctct
tgcttctacccagactcggggcagcaggcattcaacagcctggactcgctggacctggag
aacactcacctggacttcgctgccatcgtggaggatgcagagagctccacgctcctgccc
ggcccccccagccccactgggggtctcctgttgccggcacccggcggtgccaacatggct
gtgggtgacatgagctccatgctgagcaccttggctggggagagccacttcctcaactcc
ctctcttga
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integrated database retrieval system
