Tympanuchus pallidicinctus (lesser prairie-chicken): 128090541
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Entry
128090541 CDS
T08967
Symbol
NCSTN
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128090541 (NCSTN)
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Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
HydF_dimer
IBD
Motif
Other DBs
NCBI-GeneID:
128090541
NCBI-ProteinID:
XP_052558898
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All DBs
Position
Unknown
AA seq
720 aa
AA seq
DB search
MAAMERAGRRRGMTAVVGSCWVSLQAWCGPLPALLLAVLVAGSCEGNSVERKIYIPLNKT
APCVRLLNATHQIGCQSSISGDTGVIHVVEKEEDLNWVLADGPHPPYMILLDGNLFNRKV
MQQLKGTSRVSGLAVSIAKPNPPQGFSPGLKCPNDGFGVYSKDYGPQYAHCNRTVWNPVG
SGLSYEDFDFPIFLLEDANETQVIKQCYQDHNVPTDGSGPEYPLCAMQLFSHMHAVTSTV
TCMRRNSIQNTFSINPETVCDPLLDYNVWSTLHPINSSEKVDPKKEFIMVATRIDSHSFF
WNIAPGAESAVSSFVTHLAAAEALHKASDVHLLQRNIMFTFFQGETFDYIGSSRMVYDME
KDKFPLRLENIHSFVELNQVALRNGSILWMHTDPVSRLNATIEPQIKNLLDILSNSSVGA
NVTFQEVGFSQSLPPSSFQRFLRARHIPGVVLTDHQASFQNRYYQSMYDTPENIRMQYPE
GLSPEETLEYVTDTAKSLAEVATVVARALYRLAGGANDTSAIQADPKTITQMLYGFLIKM
NNSWFQSIIKPDLKGILGDDVPQHYVAVSSPVNTTYLVQYVLANLTGTVVNLTKEECLNP
EKAPNAEKEMYDYAWVQGSLDPNSTSRVPYCVRSTVRLSKALSPAFELREWGSTEYSTWT
ESRWKEIRARIFLVASKELEIITLVVGIAILVFSLVATHFINAKADVLFSIPRDPGAVAY
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgatggagagagccgggaggaggcggggaatgacggctgttgtagggagctgc
tgggtctcgctccaggcttggtgtgggccgctgccggcgctgcttctcgccgtgctggtg
gcgggctcctgcgaggggaattcggttgagaggaagatctacatccccctgaacaaaaca
gcgccgtgtgttcgtcttctgaatgctacacaccagatcggctgccagtcctccatcagt
ggagacacaggggtgatacatgtggtcgagaaggaggaggacctaaactgggtgcttgct
gatggcccacacccaccctacatgatattactagatggaaatctcttcaacaggaaggta
atgcagcagctgaagggaacctcacgagtgtcaggccttgcagtgtctattgccaaacct
aaccctccccagggattttctcctggtttgaagtgccccaatgatgggtttggtgtctat
tccaaagactatggccctcagtacgcacactgcaataggactgtgtggaatccagtgggg
agtgggctttcatatgaggattttgacttccccatttttttacttgaagatgccaatgag
actcaagttattaagcagtgttaccaagaccacaacgtccctactgatggatctggccct
gaataccctctgtgtgccatgcagcttttttcccacatgcatgctgtcaccagcactgtt
acctgcatgagacgcaactccatccaaaacaccttcagcattaatccagagactgtatgc
gatcctctgcttgattacaatgtgtggagcaccttgcaccctattaattcatctgaaaaa
gttgatcctaagaaggagtttattatggttgctacacggattgacagccattccttcttc
tggaacattgcacctggggcagagagtgctgtctcctcttttgtgacccacttggctgct
gctgaagcccttcataaggcatcagatgttcatttgctgcaaaggaatataatgttcacc
ttcttccaaggggagacttttgattatattggcagttcacgaatggtgtacgatatggaa
aaagataaatttcctctccgtttggagaacatccattcttttgtggagttgaatcaggtg
gctctaaggaatggctccattttgtggatgcatacagaccccgtctctcggttgaatgca
actattgagccccagattaaaaacctgctcgatattctgagtaatagcagcgtaggagca
aatgtcactttccaggaagttggattttctcagtctcttcctccatcttcattccaacgc
ttccttcgagcccggcacattcctggcgttgtcctgaccgaccaccaggcttccttccag
aacagatactaccagagtatgtacgacactccagagaacatccggatgcaataccccgag
gggcttagccccgaggagaccctggagtatgttacagacacagccaagtctctggcagaa
gttgccacagtggtcgcccgtgctctctaccggcttgcagggggagccaacgacacctct
gctattcaggcagatccaaaaacgatcactcaaatgctctatgggtttctgattaaaatg
aacaattcctggtttcagtccatcattaaaccagacctgaaagggattctgggtgatgat
gttccccagcactacgttgctgtttccagccctgtgaacactacctaccttgtgcagtat
gttctggccaatctcacaggcactgttgttaacctcaccaaggaagagtgcttgaaccct
gaaaaagcacctaatgctgagaaagaaatgtatgactatgcctgggtgcagggttccctg
gaccctaattcaacatcacgagtcccctactgcgttcggtcaaccgttcgcctgagcaaa
gcactctctcctgccttcgagctgagggaatggggatctacagaatattccacgtggaca
gagagtcgatggaaggagatccgtgccagaatatttctagtagccagcaaggagctagag
ataatcactttggttgtgggcattgccattctggtcttctctcttgtcgccacacatttt
atcaacgccaaagcagatgtactttttagcatccctcgggaccctggggctgtggcttac
tga
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