Tympanuchus pallidicinctus (lesser prairie-chicken): 128090693
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Entry
128090693 CDS
T08967
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128090693 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpai01009
]
128090693 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128090693 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
tpai03029
]
128090693 (RB1CC1)
Protein phosphatases and associated proteins [BR:
tpai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128090693 (RB1CC1)
Membrane trafficking [BR:
tpai04131
]
Autophagy
Autophagosome formation proteins
ULK complex
128090693 (RB1CC1)
Mitochondrial biogenesis [BR:
tpai03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
128090693 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
128090693
NCBI-ProteinID:
XP_052559125
LinkDB
All DBs
Position
Unknown
AA seq
1598 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQAKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENVYSSYLQ
SIEDIKLKLTHLGSAVSVMAKIPLLECLTRHSYRECLGRLDSSAEHGVAESEETEHGKSS
ELVLYSDVSKVNNKSMLASFCKSVEHSALEGTNPENVKDDKESGQNTAVQDNETSVELKD
DDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALINDGKHLYEAERAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQTSPQSATTPRMES
TTGTTIATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPVSPNAISDPQSPEMMVESLYSSVINAIDSR
RMQDTGSCVKDISVENASRSVCMEKCKVIAQDSKVRLRGIKEDLCHFRTLVQKEQCDFSN
SLKCTSLEIVNTIEKVKLSLEKTLKDKHQKELQSLKSEYETKINKLLEDDEESKKKIVKL
KGDLLGLEEVLQNKNNEFAMVKNEKEAVVSLQNEKDQKLHELECQMETQNSEIKKLRQSR
EIVLEDLKKLHVENDEKLQLLRAELQSLEQSRLKELENNLQARHLQEFEKMLAEHKDSLD
QLKKENQHRLEQMQESHAAIVQEKQQQVEELKLKVSDLSDLRCKLEVELALKEAETDEMK
LLLEESRNQQQETLKSQIDKETESLKKEIEKLNSKIQVSSDEYQVGLSELRTLMTIEKDQ
CISELVDRYEEESNLLRTELNKVTVLHQKTSEAEKRLSDQISELQCKLELEKNALEQEKT
EKMALCEQQEKYEAIIHRLKEEKDLLVSNQEQDKQLLIQKLNSEKEDAVQTACKEFELQK
EAVEKGLLEKIQQLEMQVNQSPPTESSAESSLVAELQEKLQEEKMKFLEQLEEQERRKNE
EVQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKMLTEQQEKDKDLIETLSEDR
ARLLEEKKKLEEEVNKLRSSNLSPSTYLAATSEACGACAADVPTDTERLASDIALEGRMD
STMETSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVL
GKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttctggtcaacactggaactactcttacctttgacacagagctt
gctgtacaaaacgtggctgatctgaaacatgcaatacaagcaaagtataagattgccatt
cagcaccaggtattggtagtcaatggaggagagtgtatggctccagacagaagagtgtgt
agttacagtgctggaacagacaccaacccaattttcttattcaacaaagaaatgattttg
tgtgagcgcccaccagccattcccaaaaccacattttcagcagagaatgagatggaattg
aaagtggaagaatctctcatgatgcctgcagttttccatacagtggcatcacgaacacag
cttgctgtggaaatgtacgaagttgccaagaagctttgctcattttgtgaaggtctggta
cacgatgaacatcttcaacatcaaggctgggctgccataatggccaacttggaagactgt
acatactcttatcaaaagctgcttttcaagtttgaaaatgtatattcaagctatttgcag
tccatagaagatattaagttgaaacttacacacttgggttctgctgtctctgtcatggcc
aagataccactgctggagtgcctaacaagacatagttacagggagtgtttaggaagattg
gattcatcagcagagcatggagtggcggaaagtgaagaaactgagcatgggaaatcttct
gaactggtgctttattctgatgtatctaaagtgaacaataaatcaatgttagcatcattt
tgcaagtcagttgaacattcagctttagaaggcacaaatcctgaaaatgtaaaagacgat
aaggagtctggtcaaaatactgctgtccaggacaatgaaacatcagtagaactgaaagat
gatgatcagccttccttcaatgtgtctttattagactggataaatgttcaagacagacct
aatgatgttgaatcactggtcagaaaatgttttgattctatgagcaggcttgatccaagg
atcatccagccctttttggcagaatgtcgacaaactattgccaaactagataatcagaac
atgaaggctattaaaggccttgaggataggctctatgcattggatcaaatgatagcaagt
tgcagcagactggtaaatgaacaaaaagaacttgctcagggatttttggctaatcagaag
agagctgagaacttgaaagatccttctgtgctacctgatttgtgtttgagtcatgcaaat
cagttgatgattatgttaactaatcacagaaagctgttagatattaaacagaaatgtacc
actgccaagcaggagcttgcaaataatctacaagtcagactaaagtggtgttgttttgta
atgcttcatgctgaccaagatggagagaaactgcaagcattgcttcgtcttgtgacagaa
ctcttagagagggtcaaggttgtagaggctctcagtactgttcctcagatgtactgttta
gctgtcgttgaggttgtgaggagaaaaatgttcataaaacactacagggagtgggcaggt
gctttaataaatgatgggaaacacctatatgaagctgaaagggcaaaaagagaatctttt
ggtaaactgttcaggaagtcttttctaaggaatcgcttgttcagaggacttgattcctgg
cctccatccttttgtacaagaaaacctcgcagatttgacagtgagcttccagatatctca
ttaagtgacttgcaatttttgcagtctttttgtccttcagaagttcagccgttactcagg
gttccaatactttgtgactttgaacctcttcaccagcatgtacgtgctttacataacctg
gtaaaagcagcacagagtttggatgaaatgtcacaaaccattactgacctgctgaatgaa
caaaaggcttccaatagtcaaacatcaccacagtctgctactacaccaaggatggaaagt
acaacaggaaccacaattgctacctcttccagaactcctccatcgctcagtcttcagggt
cccctgtgtcctcctgtgtgtccccctgctccactagaggaattgtcaccagacagcatt
gatgctcatacatttgattttgaaactattgcccacccaaacctggagcaagctctcaag
caaggatcattggacttggattcattagcagaaagtccagaatctgactttatgtcagca
gtaaatgaatttgttatagaagaaaatccagtctctcctaacgctataagtgatccacag
agtcctgaaatgatggtggaatctctttattcttcagttatcaatgcaatagatagtaga
cgtatgcaagacactggttcttgcgtaaaggacatttcagtagaaaatgcttctcgtagt
gtttgcatggagaagtgtaaggtaattgctcaagattcaaaagtacgtctaagaggtata
aaagaagatctttgccactttagaacacttgtacaaaaagaacagtgtgacttttctaat
tctttaaaatgcacttcattagaaatagtaaatactattgaaaaggtaaaactttcactt
gaaaaaacactaaaagataaacatcaaaaagaactgcagtctctgaaaagtgaatatgaa
accaaaattaataaattactggaggatgatgaggaaagcaaaaaaaagattgtaaagtta
aaaggtgacttgttaggccttgaagaagtacttcagaataagaacaatgaatttgcgatg
gtgaaaaatgaaaaggaagctgtagtttcccttcagaatgaaaaagatcagaagctacat
gaattggaatgccaaatggagacacagaattctgaaattaagaaactgagacagtcacgt
gagatagtactcgaagacttgaaaaaacttcatgttgaaaatgatgaaaaactacaactc
ctgagggcagaactccagagtttagaacaaagccgtttaaaagaactggaaaacaacctt
caggccaggcatttacaggaatttgagaagatgcttgctgagcacaaggacagtttagat
caattaaaaaaagagaaccagcatagacttgaacaaatgcaggaatctcatgcagcaatt
gtgcaagagaaacaacagcaggtagaagagttaaaactcaaagtttcagatctgtctgat
ttgaggtgtaaattagaagttgaacttgccctgaaagaagcagaaactgatgaaatgaag
cttctcttggaagaaagcagaaaccagcagcaagagaccttaaaatctcagattgataag
gaaactgaaagcttaaaaaaagagatagagaaattaaacagtaagatacaagttagcagt
gatgaatatcaagtgggcttatcagaactaagaactttaatgacaattgagaaagatcaa
tgcatttccgagctggtagacagatatgaagaagaatcaaatttgcttagaactgaacta
aacaaagtaacagttttgcatcaaaaaacttctgaagcagaaaaaagactttcagatcaa
atatcagaactgcagtgtaagttagagttggaaaagaatgccctagaacaggaaaaaaca
gaaaaaatggcactttgtgagcagcaggaaaaatatgaagctatcatccataggcttaag
gaagagaaagatctgttagtatctaaccaagagcaagacaagcagttgctgattcagaaa
ctcaattctgaaaaagaagatgccgtacaaactgcttgtaaagaatttgaattgcaaaag
gaagctgttgaaaaagggcttttggaaaaaatacaacaacttgagatgcaagtaaatcag
agtcctcccactgaatcatctgctgaatcaagcttggttgctgaacttcaagaaaagctt
caggaagaaaaaatgaaattcttggagcagcttgaagaacaagaaagaagaaagaatgaa
gaagtgcagaacattagaacatctctaactgcagaacagcagaccaactttaacactgtt
ctagcaagagaaaaaatgaagaaagaaaatataattaatgatcttagtgacaaattaaaa
atgctaacagagcagcaagaaaaagataaggatttgattgaaacactttctgaagatcga
gctcgtttacttgaggaaaagaaaaagcttgaagaagaagtcaataagctgagaagtagt
aatctttctccatcaacctacttagcagcaacttcagaagcttgtggagcctgtgcagct
gatgttcccactgatacagagagattggcttctgacattgcacttgaaggaaggatggac
tctaccatggaaaccagtatgatggctgtgcatgaaaatgtccacatgtctgaagaaaaa
cagaggatcatgttgttagaaagaactttgcagttgaaagaagaggagaataagagatta
aatcaaagattgatgtcccagagcatgtcatcagtatcctcaagacattctgaaaaaata
gcaattagagattttcaggttggcgatttggttctcataatcttagacgaaagacacgac
aattacgttttatttactgttagtccaaccttgtatttcttgcactctgaatctcttgct
gcactggacctcaaaccaggtgagtgtgcttcaggtgcatctaggagaccttgggtgctg
ggaaaagtgatggaaaaggaatattgccaggcaaaaaaggctcaaaacagatttaaagtt
cctctgggtacaaaattctacagagtgaaagcagtaccgtggaacaagaaagtataa
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integrated database retrieval system
