Tympanuchus pallidicinctus (lesser prairie-chicken): 128090791
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Entry
128090791 CDS
T08967
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpai03036
]
128090791 (CHD7)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128090791 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
128090791
NCBI-ProteinID:
XP_052559352
LinkDB
All DBs
Position
Unknown
AA seq
3011 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENTVNPMGQQMPMDQGFPSLQSSLHHPPAN
QNQAKLTHFDHYNQYEQQKMHLMDQPNRMISNAPGNGIASPHSQYHNPPVPQVPHGSGAS
GQMGVYPSMQNERHGQPFVDSGSMWGPRAVQVPDQIRAPYQQQQQQPQPTQPPQAPSGPP
GQGHPQHMQQMGNYMARGDFSMQQHGQPQQQRMNQFSQGQEGLNQGNPFIATSGPGHLSH
VPQQNPSMAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSRSQ
TVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFPSNS
GQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGS
AGIPMEVGSYPNIPHPQPSHQPPGAMGIGQRNMGPRNMQQNRPFMGMSSTPREMGGHMRP
NGCPGVGLADPQAIQERLISGQQLPSQQQSFQQQMPTCPPMQPHPGIHHQSSPPPHPHHQ
PWAQLHQSPQNTPQKVPVLQHSPSEPFLEKPVPDMTQVSGPNTQLVKSDDFLPSVEPQPQ
QKKKKKKNNHIAAEGPSKSFGKEDFPGGLDSQNLSRNSVDCSQEDKKKKKKPKAKKEPKD
PKEPKEKKEPKTPKVPKTPKEPKEKKAKNTTPKPKTSKKTSNKKTDSETNAAKKKVNKGK
EGSENSDLDKTPPPSPHPEDEDDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAG
RDSPSNTSQSEQQESADAEGPVVEKIMSSRSVKKKMENGEEVEIEEFYVKYKNFSYLHCQ
WASVEELDKDKRIQQKIKRFKAKQGQNKFLSEIDDELFNPDYVEIDRILDFSRSTDDNGE
PVTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPEMERVERPPADDWKKSESS
REYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPF
LVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHA
IITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQN
TVEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLA
PKEETIIEVELTNIQKKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLIN
GAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCL
DILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAAD
TCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVL
QSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTIT
IESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVR
KQTRLYSAVKEDELMEFSDLESDSEEKPSTKPRRPQDKSQGYARSECFRVEKNLLVYGWG
RWTDILSHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTRAL
VNHSGLSAPVPRGRKGKKVKAQSSQPMLQDADWLTTCNPDVLFQEDSYRKHLKHHCNKVL
LRVRMLYYLRQEVIGDQADRILEGADSSEVDVWIPEPFHAEVPADWWDKEADKSLLIGVF
KHGYEKYNSMRADSTLCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKP
TRTPFKDEIDEFANSPPEDKEESIEIHPNKHSESNSELGQLYWPNTSTLTTRLRRLITAY
QRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIITEKRQKWTRREEADFYRVVST
FGIIFDPIKHQFDWNQFRAFARLDKKSDESLEKYFNGFVNMCRRVCRMPVKPDDEPPDLS
TMIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGKHDKDL
LIGAAKHGVSRTDYHILNDPELSFLEAHKNFAQNRGTGNANTVSSLHPVGAGCSQTPPIV
PSTPVQEEKSTEQTESKVEGSENPAAKEKSDIKEETDIADKDTKQDCDAEAETGSVKCEL
KDIEMSTDVDPKSISEKGSEEDEEEKLDDDDKSEESSQPEAGAVSQGKNFDEESNASMST
ARDETRDGFYMEDGDPSVVQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQ
MFDFQGLIPGYTPTAVDSPLQKRSFAELSMIGQASISGSEDITASPQLSKEDALNLSVPR
QRRRRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSNF
SSVTSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLIDGEPPMKRRRGRRKN
VEGLDLLFMSNKRTSLTVEDAEVTKAFEEDMEALPARNIPSPGQLDPDTRIPVINLEDGT
RLVGEDAPKNKDLVEWLKLHPTYTVDMPSYVPKSADVLFSSFQKPKQKRHRCRNPNKLDI
NTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPES
MFDRLLTGPVVREEGASRRGRRPKSEIAKAAAAAAAVASTSGINPLLMNSLFAGMDLTSL
QNLQNLQSLQLAGLMGFPPGLATAAAAGGDAKNPAAMLPLMLPGMAGLPNMFGLSGLLNN
PITATTGNATTASGQGETEDGASKAEEKKNENEEENKDSEKSTDTVSATDSANGSVSAAT
AATTATATTTTTTNTGLPTNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAG
LQNAVGSNEEKATDKTEGTAFKDEENLEGSDAEESLDKTADSSVLEDEIAQGEELDSLDG
GEEIENNENDE
NT seq
9036 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaggaatgatgagtctgtttggagaagatgggaatattttcagtgaaggg
ctggaaggtctcggagaatgtggatatcctgaaaacacagtaaatcccatgggacagcaa
atgcccatggatcaaggatttccctctttacagtcatctcttcatcatccccctgcaaat
caaaatcaagcaaagttgacccattttgatcactataatcaatacgaacagcagaaaatg
cacctgatggatcagccgaacagaatgataagcaatgcccctgggaatggtatagcgtct
cctcattcacagtatcacaaccctcccgttcctcaggttcctcatggcagcggtgccagt
ggtcagatgggagtctatcccagcatgcagaacgaaagacacgggcaacccttcgtagac
agtggctcgatgtgggggccgcgggcagttcaagtgccagaccagataagagcaccatac
cagcagcagcagcaacagccgcaaccgacacagccgccacaggcaccctccggacccccc
gggcagggccatcctcagcacatgcagcagatgggaaactacatggctcgtggtgatttt
tcaatgcaacagcacggtcagccgcaacagcagaggatgaaccagttttctcaaggccag
gaaggcctcaatcagggaaaccctttcattgccacctcaggacctggccacttgtctcat
gtgccccagcagaatcccagtatggcaccttctttgcgacattcagtccagcaatttcac
caccatccccccactgctctccatggagaatcagtagcccacagccctagattctcccct
aatcctccccagcagggtgctgttaggccgcaaacacttaattttagttctcggagccag
acggtaccctcacctactataaacaactcagggcagtattctcgatatccttacagtaac
cttaatcagggattagttaataatacagggatgaatcagaatttaggccttacaaataac
actccaatgaatcagtctgtaccaagatacccaaatgctgtaggatttccatcaaacagt
ggtcaaggactaatgcaccagcaacccatccaccctagtggctcacttaaccaaatgaac
acgcaaactatgcacccttcacagcctcagggaacttatgcctctccacctcccatgtca
cctatgaaagcaatgagtaatccagcaggtacgcctcctccacaggttaggcccggtagt
gctggaataccaatggaagttggcagttatccaaatataccccatcctcagccatcacac
cagccccctggtgccatgggaattggacaaaggaatatgggccccagaaacatgcaacag
aatcgtccttttatgggtatgtcttcaacaccacgggagatgggtgggcacatgagacca
aatggttgtccaggcgttggccttgcggatccacaagcaatacaagaacgactaatatct
ggccagcagcttcctagtcaacagcagtcgtttcaacagcaaatgccaacctgtcctccc
atgcagcctcatccagggatacatcatcagtcttcaccaccgccacatcctcatcatcag
ccttgggcacagcttcaccagtcaccacaaaacacaccacaaaaagtgcctgtccttcag
cattctccatcggaaccttttttagagaaaccagtgccggatatgactcaggttagtgga
ccgaatacccagctagtgaaaagtgatgattttctgccatcagttgaaccgcagccacag
caaaagaaaaagaaaaagaaaaacaatcacattgctgcagaaggtcccagtaaaagtttt
ggtaaggaagactttcctgggggacttgacagccagaatctaagcaggaactcagtggat
tgctcccaagaagataaaaagaaaaagaaaaagcccaaggcaaaaaaagaaccgaaggat
cctaaagagcccaaggaaaagaaggaacccaagacccccaaagtccctaagacccctaaa
gagccaaaggaaaagaaagcaaaaaataccacgccaaaacccaagaccagcaaaaagaca
agtaacaagaaaacagattcagaaactaatgctgcgaagaaaaaggttaacaagggaaag
gaaggttctgaaaactcagatttggataaaactccaccaccttcacctcatcctgaagat
gaagatgatccaggagttcagaagcgacgctccagcaggcaggtgaagaggaagcgttac
acagaagacttggaattcaagatttcagatgaggaggcagatgatgctgatgctgctgga
agagattctccttcaaatacttctcaatcagagcaacaggaatctgctgatgctgaaggt
cctgttgtggagaaaatcatgagtagtcgctcagtcaagaaaaagatggagaatggagag
gaagtagaaatagaggaattctatgtgaagtacaaaaacttttcttaccttcattgtcag
tgggcatctgtggaagagctggacaaagacaagagaattcagcagaagattaagcggttt
aaggcaaaacagggccagaacaaattcctttcagaaattgatgatgagctttttaatcca
gattatgtggaaattgatcgaatcttggatttttcacgtagcacagatgataatggagag
cctgtaactcattatctggtgaagtggtgttcgctaccttatgaagacagcacttgggag
ctcaagcaagacatcgaccaagctaagattgaagagtttgagaaactgatgtctagagag
ccagaaatggagcgtgtggagcgacctcctgccgatgactggaagaaatcggagagttcc
agggagtataaaaacaataacaaactcagggaataccagttggagggagtaaactggctt
cttttcaattggtacaacacgcgaaactgcattttagcagatgaaatggggttgggaaag
actatccagtccattacgtttctctatgagatatatttgaaaggaatccatggtcctttc
ttggttattgcaccgttgtccacaattcccaactgggaaagggagttccgcacctggaca
gagttgaatgtggttgtgtatcatgggagtcaagcaagccggcggaccattcagttgtat
gaaatgtatttcaaagatccacagggtcgtgtgataaaaggctcttacaagttccatgct
attatcacaacatttgaaatgattttgactgactgccccgagcttcgaaacattccatgg
cgttgtgtggtaatcgatgaggcccacaggctgaaaaacaggaattgtaagcttttggaa
ggactcaagatgatggatctggagcataaagtgctgcttactggaactcctttgcaaaat
acagtggaagagctatttagcttgcttcactttttggaaccaggtcgcttcccatccgaa
accacgttcatgcaagaatttggggatctgaaaactgaagaacaggtgcagaaactgcaa
gctattttgaagccaatgatgctgagacgtctcaaggaggatgtggaaaagaacctggcc
cccaaagaggaaaccatcattgaagttgagctgacgaatattcagaagaaatactatcgt
gctattcttgagaagaattttgcgtttctctcaaagggtggaggtcaggcaaatgtacct
aatcttttaaacactatgatggaactaagaaaatgctgcaatcatccgtaccttattaat
ggtgctgaagagaaaattttggaagagtttaaagaaacacacaatgccgactctccagat
tttcagctccaggcaatgatccaggctgctggcaagctagtactgattgacaagctgctg
ccaaaactgaaggctggtggccacagggtgcttatcttttcccagatggtgcgctgcttg
gacatactggaagactacctcattcagagacggtacccatacgaacgaattgatggccga
gtaagaggcaacttgcgtcaggcagctattgacaggttttcaagacctgattctgatagg
tttgttttcctgctgtgtacaagggcaggaggcttgggcattaatcttactgctgctgat
acctgcatcatttttgattcagactggaaccctcaaaatgacctccaggctcaagcacga
tgtcacagaataggacagagcaaatcagtgaaaatttacaggttgattacaaggaattct
tatgaaagggagatgtttgacaaagctagcttgaagcttggccttgacaaggctgtgcta
caatctatgagtggaagagaaaatgctacaaatggggtgcaacagctttctaaaaaagaa
atagaagatcttcttcgaaagggagcatacggtgctctgatggacgaggaggatgaaggg
tctaagttttgtgaagaggatattgatcaaattctcttaaggcgaacacacacaattact
attgaatctgaaggaaaaggctcaacatttgcaaaggctagttttgttgcatctgggaac
aggacagacatttccttggatgaccctaatttttggcagaagtgggcaaagaaggctgaa
ctggatattgatgctttaaatggaaggaataacctagttattgatacaccaagagtaaga
aagcaaaccagactctacagtgcagtcaaagaggatgaactgatggagttttcagacctg
gaaagtgattctgaagaaaagcctagcacaaagccccgtaggcctcaggacaaatcacag
ggttatgcaagaagtgaatgtttcagggtagagaagaacttgttggtttatggctggggt
cgttggactgacatcctctcacatgggcgctataaacgtcagctaacagaacaagatgtg
gaaaccatctgccggactatcctggtatattgccttaatcattacaaaggggatgaaaat
atcaaaagtttcatctgggatctgatcactccaactgcagatgggcaaactcgagctttg
gttaatcattccggcctgtctgcgccagtgcccagagggaggaaaggcaagaaagtaaaa
gcccagagttcacagccaatgcttcaagatgctgattggctcaccacctgtaatccggat
gtattatttcaagaagacagctatagaaaacatctcaaacatcattgtaataaggtcctg
ctgcgtgtccgcatgctgtactatctacgacaagaagttataggggaccaagcagacagg
atcttagagggtgctgactcaagtgaagtagatgtgtggatacctgagccgttccatgct
gaagttcctgcagactggtgggataaggaggcggataaatcccttttaattggagtattc
aaacatggctatgagaagtacaattccatgagagctgattcaacactgtgctttctggaa
cgggttggcatgcctgatgcaaaggccatagctgctgaacagagagggacagacatgtta
gcagatggtggtgatggaggtgaattcgacagagaggatgaagatccagaatataagcca
acaagaactcctttcaaggatgaaattgatgaatttgcaaactcacctccagaagacaaa
gaagagtccattgaaatccacccaaacaagcacagtgaaagcaattctgagttaggccaa
ctctactggcccaacacttcaaccctgactacccgtctgcgtcgcctcattactgcctat
cagcgcagctataaaaggcaacaaatgaggcaagaggcactaatgaagactgaccgcagg
agacgtcggcctcgggaagaagtgagggcactagaagcagaaagggaggctataataact
gagaaacgacaaaaatggacaagaagagaagaagccgatttttatcgtgtagtgtctact
tttggaattatttttgatcccataaaacatcaatttgactggaatcaattcagagcattt
gccaggcttgataaaaagtccgatgaaagcttggagaagtattttaatggctttgtgaat
atgtgtagacgagtgtgccgaatgccggtcaagccagatgatgagcctcctgatctttct
actatgattgaaccgatcacagaagaacgtgcttccagaactttatatcgcattgagctc
ttacggaaaatccgtgaacaggttcttcatcacccacagctgggggagaggctaaagctt
tgccaaccaagcttggatctgccggagtggtgggagtgtggtaaacatgacaaagactta
ctgattggtgctgctaaacatggagtcagtaggacagattatcacattctgaatgatcct
gagctgtcttttcttgaggcccacaaaaactttgctcaaaacagagggacgggtaatgca
aatactgtctcttctctacaccctgtgggtgctggctgcagtcaaacaccacctattgtc
ccatccacaccagtacaagaagaaaaaagtacagaacaaacggagtctaaagttgaagga
tctgaaaatccagcagccaaagaaaaatctgatatcaaggaagaaacagatattgctgat
aaagacactaagcaggattgtgatgctgaggctgagactggctctgttaaatgtgaattg
aaagatatagaaatgagtacagacgtagacccaaaatcaatttctgaaaaaggttcagaa
gaagatgaagaggagaaactggatgatgatgacaaatcagaagagtcctcccaacctgaa
gcaggagcagtttctcagggtaagaattttgatgaagaaagcaatgcctctatgagtacc
gcaagggatgaaacgcgcgatggattctacatggaagatggggatccttctgtggtccag
ctgcttcatgagagaacatttgccttttctttctggcctaaggaccgagtaatgatcaac
cgattagacaacatctgtgaagcagtgctgaaagggaagtggccagtaaataggcgccag
atgtttgatttccaggggctcatacctgggtatactccaacagctgtggacagccctctg
caaaaaaggagctttgcagagctctccatgattggtcaagccagtatcagcggtagtgaa
gacatcactgcttctcctcagttgtcaaaggaagatgcactcaatttatcggttccacgt
cagaggaggaggaggagacgaaaaattgaaatcgaggctgagagagctgccaaaagaaga
aatcttatggaaatggttgcccagttacgtgagtctcaggtggtctcagaaaatggacaa
gaaaaggttgtagatttatcaaaggcctcacgagaggcaacaagttctacctcaaatttt
tcatctgttacttcaaagtttatcttgcctaatgtctccacacccgtgtctgatgccttt
aaaactcaaatggagctgctgcaagcaggtctttcacgcacacccacaaggcatctgcta
aatggctctttaatagatggagaaccgcccatgaagaggaggagaggaaggaggaaaaat
gtagaagggcttgatctgttatttatgagcaacaaacggacatcattgactgtagaggat
gcagaagtgaccaaagcttttgaagaagatatggaggccctaccagcaaggaacattccg
tctcctggtcaactggatccagacactcgcatccctgtaatcaatctagaggatgggacc
aggctggtgggagaagatgctcccaaaaacaaggacttagttgaatggcttaaattgcat
cctacttacactgtagatatgccaagttatgtaccaaagagtgcagatgtgctgttttcc
tcatttcagaagccgaaacaaaaacgacacagatgtcgaaaccctaataaactggatata
aacaccttgacaggagaagaaagggtacctgttgtaaataagcgaaatgggaagaagatg
ggtggagctatggcccctccaatgaaggacttgccaagatggttagaagaaaatcctgaa
tttgctgttgctccagattggactgacattgttaaacagtctggttttgttccagagtct
atgtttgaccgtcttctcactggacctgttgtgagggaggaaggagcaagcagaagagga
agaaggccaaaaagtgaaattgccaaagcagctgcagcagctgctgctgtagcatcaact
tcgggaatcaacccactactaatgaacagtctgtttgctggaatggacctcaccagcctc
cagaatctacagaacctgcagtctctccagctcgcaggcctcatgggctttccgccaggg
ctagcaacagctgctgctgctgggggggatgctaaaaatccggctgccatgttgcctctg
atgttgccagggatggcaggattgcccaatatgtttggactgagtggattgttgaataac
ccaataacagctactactggaaatgccactactgcttccggtcaaggagagactgaggat
ggcgcttcaaaagctgaagagaagaaaaatgagaatgaagaggagaacaaagactctgag
aaaagcacagacactgtttctgctactgactctgcgaatggatctgtcagtgctgctact
gcggcgactaccgccactgccaccactaccaccaccaccaacactggattgcccacaaac
cctctggccttcaatcctttcctgctgtctaccatggctcctggcctgttctatccatct
atgtttctacctccgggactgggaggattgactctgcctggtttcccagcactagcagga
cttcagaatgcagtgggctccaacgaagagaaggctactgacaaaactgaaggaactgcc
tttaaagatgaagaaaacttggaaggcagtgatgcagaggagagccttgataaaactgca
gattcctccgttttagaagatgaaatagcacagggtgaagaattagactcacttgatggg
ggggaagaaatagaaaacaatgaaaatgatgaataa
DBGET
integrated database retrieval system
